DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and RLP19

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_179112.1 Gene:RLP19 / 815997 AraportID:AT2G15080 Length:983 Species:Arabidopsis thaliana


Alignment Length:1089 Identity:257/1089 - (23%)
Similarity:398/1089 - (36%) Gaps:366/1089 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 VALYKFPEFMHSSVRY----------IEMSNTHLQSVDDETF-QGLRLKTLKLIDN--------- 130
            :.::.|.:...:|.|:          :|..| ..:::::..| ..:.|||....:|         
plant    13 ILIFNFLDEFAASTRHLCDPDQSDAILEFKN-EFETLEESCFDSNIPLKTESWTNNSDCCYWDGI 76

  Fly   131 ----ELQDISE--RSFSTM---------------THSLMTLDISGNK-MQHLPLDALQRLHSLSR 173
                :..|:.|  .|||.:               ...|.|||:|.|. :..:| .:|:.|.:|:.
plant    77 KCDAKFGDVIELDLSFSCLRGQLNSNSSLFRLPQLRFLTTLDLSNNDFIGQIP-SSLETLSNLTT 140

  Fly   174 LVAQRNHITTLDGNWDAQHDTLRSLHLSDNDITEVAPGGGSIEVVSQNDNSSQ-PSSLAAVQTRL 237
            |...|||.:   |...:....|..|...|               .|.|:.|.| ||||.      
plant   141 LDLSRNHFS---GRIPSSIGNLSHLIFVD---------------FSHNNFSGQIPSSLG------ 181

  Fly   238 ETSNSIYPPSPSSGDRTTGGRPFEQLQKLLWLDLSNN----RIYHVAGNYLPRSLVTMDLSSNLL 298
                                    .|..|...:||.|    |:....||.  ..|.|:.||.|  
plant   182 ------------------------YLSHLTSFNLSYNNFSGRVPSSIGNL--SYLTTLRLSRN-- 218

  Fly   299 TVFPQQLFEQLPELRIVSLRDNLIRSVQWKELQVRPLRMHLERLDLGQN--------CIENLESD 355
                 ..|.:||. .:.||                   .||..|.|..|        .:.||.  
plant   219 -----SFFGELPS-SLGSL-------------------FHLTDLILDTNHFVGKIPSSLGNLS-- 256

  Fly   356 YFQQNYSDVHLRALNL-EQNFVTQLPEAVFKATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDL 419
                     ||.:::| :.|||.::|.::...:.:...:|:.|.|....||:|..|.: |:.|::
plant   257 ---------HLTSIDLHKNNFVGEIPFSLGNLSCLTSFILSDNNIVGEIPSSFGNLNQ-LDILNV 311

  Fly   420 ERNRLT-TVPVALSSLHHLKYLYLTSNQISQLNNLP---SFTENLRVLSLSGNNFSMIPVLGLKN 480
            :.|:|: :.|:||.:|..|..|.|.:|:::  ..||   |...||::...:.|:|:         
plant   312 KSNKLSGSFPIALLNLRKLSTLSLFNNRLT--GTLPSNMSSLSNLKLFDATENHFT--------- 365

  Fly   481 YTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDI 545
                          ..:|..:|.:.|    |:||.|.||::..               ||.|.:|
plant   366 --------------GPLPSSLFNIPS----LKTITLENNQLNG---------------SLGFGNI 397

  Fly   546 TIHHPLVFENVSRTLKILELSFAVFPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQ 610
            :.:                                       |.|..|.|.|||.:...:.|.::
plant   398 SSY---------------------------------------SNLTVLRLGNNNFRGPIHRSISK 423

  Fly   611 MRELSYINLS-FNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQT-------FHSLGDLQTL 667
            :..|..::|| :|     .:||......|||..|:  |..|..|...|       ..|...|.||
plant   424 LVNLKELDLSNYN-----TQGLVDFTIFSHLKSIE--YLNLSHLNTTTTIDMYEILSSFKLLDTL 481

  Fly   668 NLQSNRLRTIARHAFHNL-------------------EFLR------YLDLSYNRLVNISHGAFT 707
            :|..:.:.|..:.:..|.                   :|||      .||:|.|::.....|...
plant   482 DLSGSHVSTTNKSSLSNSSLVLISQLYLSGCGITEFPKFLRSQELMLTLDISNNKIKGQVPGWLW 546

  Fly   708 VLPNLAALDLMHNQLCSLSLKSFLYVSNTTTP---LRLNVSHN----HIASFYDELSSYMYIYQL 765
            :||.|..::|.:|........:.|.:::...|   .:|..|:|    :|.||..||.   |:..|
plant   547 MLPVLNYVNLSNNTFIGFERSTKLGLTSIQEPPAMRQLFCSNNNFTGNIPSFICELP---YLSTL 608

  Fly   766 DISHNHVTKSDSFTNLANT----LRFLNLAHNQL-GSLQSHAFGDLEFLEILNVAHNNLTSLRRR 825
            |.|:|....|.. |.:.|.    |:.|||.||:| |.|..:.|   |.|..|:|.||.|.....|
plant   609 DFSNNKFNGSIP-TCMGNIQSPYLQALNLRHNRLSGLLPENIF---ESLISLDVGHNQLVGKLPR 669

  Fly   826 SFQGLNSLQELDLSHNQ-----------LDQLQV--------------EQFSNLRKLRILRINSN 865
            |...::||..|::..|:           |.:|||              .|||   ||||:.|:.|
plant   670 SLSHISSLGLLNVESNKISDTFPLWLSSLQELQVLVLRSNAFYGPIEKTQFS---KLRIIDISGN 731

  Fly   866 RLR-ALPREVFMN-TRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQF 928
            :.. .||...|:| |.:..||..|:|.:          |.|:.::.|| .:..|.|:.:.:|.  
plant   732 QFNGTLPANFFVNWTAMFSLDENEDQSN----------GETMSNMYMS-TDYFYFDSMVLMNK-- 783

  Fly   929 LYDISLARNRITILPDNTFSFLNNLTNLDLSQN------PLVTTNLREVFVHTPRLRKLSLH--- 984
              .:.:...|:          |...|.:|.|.|      |.....|:|:.|.......||.|   
plant   784 --GVEMELERV----------LKVFTVIDFSGNKFEGEIPKSIGLLKELHVLNLSNNALSGHIAS 836

  Fly   985 HMGLYVLPPLKLPLLSYLDVSGNYLQELSP--LGSLRHLRHVNVSHNKL 1031
            .||       .|..|..||||.|.|....|  ||.|.:|.::|.|||:|
plant   837 SMG-------NLMALESLDVSQNKLSGEIPQELGKLTYLAYMNFSHNQL 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380 4/29 (14%)
LRR_8 121..181 CDD:290566 22/90 (24%)
LRR_RI 122..350 CDD:238064 58/271 (21%)
leucine-rich repeat 122..146 CDD:275380 9/53 (17%)
leucine-rich repeat 147..170 CDD:275380 9/23 (39%)
leucine-rich repeat 171..194 CDD:275380 6/22 (27%)
leucine-rich repeat 195..214 CDD:275380 3/18 (17%)
leucine-rich repeat 215..236 CDD:275380 8/21 (38%)
LRR_8 265..322 CDD:290566 17/60 (28%)
leucine-rich repeat 266..287 CDD:275380 7/24 (29%)
leucine-rich repeat 288..311 CDD:275380 7/22 (32%)
leucine-rich repeat 312..338 CDD:275380 2/25 (8%)
LRR_RI 315..546 CDD:238064 54/243 (22%)
leucine-rich repeat 339..365 CDD:275380 6/33 (18%)
LRR_8 365..424 CDD:290566 17/59 (29%)
leucine-rich repeat 366..388 CDD:275380 6/22 (27%)
leucine-rich repeat 389..412 CDD:275380 7/22 (32%)
LRR_8 413..470 CDD:290566 18/60 (30%)
leucine-rich repeat 414..436 CDD:275380 8/22 (36%)
leucine-rich repeat 437..459 CDD:275380 7/24 (29%)
leucine-rich repeat 460..483 CDD:275380 3/22 (14%)
LRR_8 482..545 CDD:290566 12/62 (19%)
leucine-rich repeat 484..510 CDD:275380 3/25 (12%)
leucine-rich repeat 511..534 CDD:275380 6/22 (27%)
leucine-rich repeat 535..589 CDD:275380 4/53 (8%)
LRR_RI 588..891 CDD:238064 105/374 (28%)
LRR_8 588..650 CDD:290566 19/62 (31%)
leucine-rich repeat 590..613 CDD:275380 7/22 (32%)
leucine-rich repeat 614..639 CDD:275380 6/25 (24%)
LRR_8 638..698 CDD:290566 22/91 (24%)
leucine-rich repeat 640..663 CDD:275380 7/29 (24%)
leucine-rich repeat 664..687 CDD:275380 6/41 (15%)
LRR_8 688..749 CDD:290566 17/73 (23%)
leucine-rich repeat 688..711 CDD:275380 8/28 (29%)
leucine-rich repeat 712..735 CDD:275380 4/22 (18%)
leucine-rich repeat 740..783 CDD:275380 15/46 (33%)
LRR_8 784..843 CDD:290566 23/74 (31%)
leucine-rich repeat 785..808 CDD:275380 10/23 (43%)
leucine-rich repeat 809..832 CDD:275380 8/22 (36%)
LRR_RI <827..1053 CDD:238064 66/243 (27%)
LRR_8 832..890 CDD:290566 25/84 (30%)
leucine-rich repeat 833..856 CDD:275380 10/47 (21%)
leucine-rich repeat 857..879 CDD:275380 9/23 (39%)
leucine-rich repeat 880..900 CDD:275380 4/19 (21%)
LRR_8 904..963 CDD:290566 12/64 (19%)
leucine-rich repeat 905..928 CDD:275380 5/22 (23%)
leucine-rich repeat 929..952 CDD:275380 2/22 (9%)
leucine-rich repeat 953..977 CDD:275380 8/29 (28%)
leucine-rich repeat 978..1020 CDD:275380 17/46 (37%)
LRR_8 1019..1074 CDD:290566 6/13 (46%)
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
RLP19NP_179112.1 PLN00113 3..>646 CDD:331614 180/817 (22%)
leucine-rich repeat 114..137 CDD:275380 9/23 (39%)
leucine-rich repeat 138..161 CDD:275380 7/25 (28%)
leucine-rich repeat 162..185 CDD:275380 11/67 (16%)
leucine-rich repeat 186..209 CDD:275380 7/24 (29%)
leucine-rich repeat 210..233 CDD:275380 10/49 (20%)
leucine-rich repeat 234..257 CDD:275380 6/33 (18%)
leucine-rich repeat 258..281 CDD:275380 6/22 (27%)
leucine-rich repeat 282..305 CDD:275380 7/22 (32%)
leucine-rich repeat 306..329 CDD:275380 8/22 (36%)
leucine-rich repeat 330..351 CDD:275380 7/22 (32%)
leucine-rich repeat 354..377 CDD:275380 5/45 (11%)
leucine-rich repeat 378..402 CDD:275380 10/77 (13%)
leucine-rich repeat 403..424 CDD:275380 7/20 (35%)
leucine-rich repeat 427..451 CDD:275380 9/28 (32%)
leucine-rich repeat 452..477 CDD:275380 6/26 (23%)
leucine-rich repeat 507..526 CDD:275380 3/18 (17%)
leucine-rich repeat 527..550 CDD:275380 6/22 (27%)
leucine-rich repeat 551..574 CDD:275380 4/22 (18%)
leucine-rich repeat 575..604 CDD:275380 9/31 (29%)
PLN00113 <604..692 CDD:331614 31/91 (34%)
leucine-rich repeat 605..630 CDD:275380 7/25 (28%)
leucine-rich repeat 631..655 CDD:275380 12/26 (46%)
PLN00113 <656..739 CDD:331614 25/85 (29%)
leucine-rich repeat 656..676 CDD:275380 7/19 (37%)
leucine-rich repeat 677..700 CDD:275380 4/22 (18%)
leucine-rich repeat 701..722 CDD:275380 6/23 (26%)
leucine-rich repeat 723..795 CDD:275380 23/96 (24%)
leucine-rich repeat 796..819 CDD:275380 6/22 (27%)
PLN00113 <808..962 CDD:331614 27/78 (35%)
leucine-rich repeat 820..843 CDD:275380 7/29 (24%)
leucine-rich repeat 844..867 CDD:275380 11/22 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 118 1.000 Inparanoid score I2000
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.050

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