DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4168 and Tlr8

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_001094479.1 Gene:Tlr8 / 684440 RGDID:1590327 Length:1029 Species:Rattus norvegicus


Alignment Length:864 Identity:215/864 - (24%)
Similarity:349/864 - (40%) Gaps:185/864 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 RDNLIRSVQWKELQV----RPLRMHLERLDLGQNCIENLESDYFQQNYSDVHLRALNLEQNFVTQ 378
            |.|.:.:.:....|:    :.:..::..:||..|.|.::.::.||:..   :|..:||..|...|
  Rat    37 RHNALVTAECNHRQLHEVPQTIGKYVTDVDLSDNTIMHITNESFQKFR---NLTKINLNHNAKQQ 98

  Fly   379 LPEAVFKATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVPVALSSLHHLKYLYLT 443
            .|........|..             .||..|....|.| ||.|:|.|:|..|.  ..||.|.|.
  Rat    99 HPNENKNGMNITE-------------GAFLSLRNLTELL-LEDNQLYTIPAGLP--ESLKELSLI 147

  Fly   444 SNQISQLNNLPSF-TENLRVLSLSGNNFSMIPVL------GLKNYTQLSYLNMGYNSITDIPEGI 501
            .|.|.|:....:| ..||..|.|..|.:.....:      ...|...|..|::.:|::..:|..:
  Rat   148 QNNIFQVTKNNTFGLRNLERLYLGWNCYFKCNQIFKVEDGAFNNLINLKLLSLSFNNLFSVPPKL 212

  Fly   502 FAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFN-DITIHHPLVFE--NVSRTLKIL 563
                  .|:|..:.|.|.||:.:....|.|||.:..:.||.| ....:.|...|  |:|.:::|.
  Rat   213 ------PSSLSKLFLSNAKISTITQEDFKGLEHLILLDLSGNCPRCFNAPFPCESCNLSASIRIH 271

  Fly   564 ELSFAVFPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQL-KTL 627
            .|:|.                 .|:||.:|.|.:.:|:.:.:..|..:..|..::|.||.| :.:
  Rat   272 PLAFQ-----------------NLTQLRFLNLSSTSLRTIPSTWFDNLTNLKELHLEFNYLVQEI 319

  Fly   628 PRGLFQSDAHSHLVEIDLSYNGLERLEAQ------TFHSLGDLQTLNLQSNRLRTIARHAF---H 683
            ..|.|.:...| |..:|||:|.:.:...|      .|..|..|:.|:|:....|.:.:..|   .
  Rat   320 ASGAFLTKLPS-LQTLDLSFNFIHKEYLQYITISPNFSMLRSLRKLHLKGYVFRELKKEHFKPLQ 383

  Fly   684 NLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNH 748
            ||..|..::|..|.:..|...||...|||..:.|..|::.|:       :..|......|.....
  Rat   384 NLPNLTTINLGINFIEKIDFKAFQDFPNLKVIYLSGNRIASV-------IDGTDHSSWRNRLRKP 441

  Fly   749 IASFYDELSSYMYIYQ----------------LDISHNHV-----TKSDSFTNLANTLRFLNLAH 792
            :::.|||...:|..|.                ||:|.|::     ::.:.|.::|    .|||:.
  Rat   442 LSTDYDEFDPHMNFYHSTEPLIKPQCTTYGKALDLSLNNIFVIGKSQFEGFQDIA----CLNLSF 502

  Fly   793 NQLGS-LQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFS---- 852
            |..|. |....|..:..::.|::.:|.|.....::|..|:.|:.||||||      ...||    
  Rat   503 NANGQVLNGTEFSSMPHIKYLDLTNNRLDFDDNQTFSDLHDLEVLDLSHN------AHYFSIAGV 561

  Fly   853 --------NLRKLRILRINSNRLRALPRE-----------VFMNTRLEFLDIAENQLSVWPVPAF 898
                    ||.||::|.::.|.:..|..|           ||...||:.|..| |....|.:  |
  Rat   562 THRLGFIQNLIKLKVLNLSHNGIYTLTDEYKLQSKSLKELVFSGNRLDRLWNA-NDGKYWSI--F 623

  Fly   899 TDIGFTLRSIQMSHNNLEYLDASMFIN-SQFLYDISLARNRITILPDNTFSFLNNLTNLDLSQNP 962
            |.:. ||..:.:|:|||:.:....|:| .|.|.::.:..||:.........:..:|..|||.:|.
  Rat   624 TSLE-TLTRLDLSYNNLQQIPNEAFLNLPQSLQELHINDNRLRFFNWTLLQYFPHLHVLDLGRNE 687

  Fly   963 L-VTTNLREVFVHTPRLRKLSLHHMGLYVLPPLKLPLLSYLDVSGNYLQELSPLGSL---RHLRH 1023
            | ..||....|.|:  |:.|.|:|                     |:...| |.|.|   |:|.:
  Rat   688 LYFLTNCLSKFTHS--LKTLLLNH---------------------NHFSHL-PAGFLSEARNLVY 728

  Fly  1024 VNVSHN--KLTNASCAAEHLPPSVRVLDLAHNPLRRITLH-----DLASLRHLAELN-------I 1074
            :::|.|  |:.|.|........::.||||..|       |     |::..|...|.|       :
  Rat   729 LDLSFNTIKMINKSSLQTETKTNLSVLDLQGN-------HFDCTCDISDFRSWLEENPHVRIPRL 786

  Fly  1075 LDVKVTNP--QAFSKLRSL 1091
            :||..:||  |.:..:.||
  Rat   787 VDVICSNPGDQRWKSVMSL 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566
LRR_RI 122..350 CDD:238064 6/35 (17%)
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
LRR_8 265..322 CDD:290566 2/3 (67%)
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380 3/23 (13%)
LRR_RI 315..546 CDD:238064 59/239 (25%)
leucine-rich repeat 339..365 CDD:275380 6/25 (24%)
LRR_8 365..424 CDD:290566 15/58 (26%)
leucine-rich repeat 366..388 CDD:275380 6/21 (29%)
leucine-rich repeat 389..412 CDD:275380 4/22 (18%)
LRR_8 413..470 CDD:290566 22/57 (39%)
leucine-rich repeat 414..436 CDD:275380 9/21 (43%)
leucine-rich repeat 437..459 CDD:275380 8/22 (36%)
leucine-rich repeat 460..483 CDD:275380 5/28 (18%)
LRR_8 482..545 CDD:290566 17/63 (27%)
leucine-rich repeat 484..510 CDD:275380 4/25 (16%)
leucine-rich repeat 511..534 CDD:275380 8/22 (36%)
leucine-rich repeat 535..589 CDD:275380 11/56 (20%)
LRR_RI 588..891 CDD:238064 90/357 (25%)
LRR_8 588..650 CDD:290566 19/62 (31%)
leucine-rich repeat 590..613 CDD:275380 5/22 (23%)
leucine-rich repeat 614..639 CDD:275380 7/25 (28%)
LRR_8 638..698 CDD:290566 19/68 (28%)
leucine-rich repeat 640..663 CDD:275380 8/28 (29%)
leucine-rich repeat 664..687 CDD:275380 7/25 (28%)
LRR_8 688..749 CDD:290566 14/60 (23%)
leucine-rich repeat 688..711 CDD:275380 6/22 (27%)
leucine-rich repeat 712..735 CDD:275380 4/22 (18%)
leucine-rich repeat 740..783 CDD:275380 11/63 (17%)
LRR_8 784..843 CDD:290566 19/59 (32%)
leucine-rich repeat 785..808 CDD:275380 7/23 (30%)
leucine-rich repeat 809..832 CDD:275380 5/22 (23%)
LRR_RI <827..1053 CDD:238064 71/255 (28%)
LRR_8 832..890 CDD:290566 24/80 (30%)
leucine-rich repeat 833..856 CDD:275380 11/34 (32%)
leucine-rich repeat 857..879 CDD:275380 7/32 (22%)
leucine-rich repeat 880..900 CDD:275380 6/19 (32%)
LRR_8 904..963 CDD:290566 17/59 (29%)
leucine-rich repeat 905..928 CDD:275380 7/23 (30%)
leucine-rich repeat 929..952 CDD:275380 3/22 (14%)
leucine-rich repeat 953..977 CDD:275380 10/24 (42%)
leucine-rich repeat 978..1020 CDD:275380 9/44 (20%)
LRR_8 1019..1074 CDD:290566 17/68 (25%)
leucine-rich repeat 1045..1068 CDD:275380 7/27 (26%)
leucine-rich repeat 1069..1090 CDD:275380 7/29 (24%)
leucine-rich repeat 1091..1114 CDD:275380 1/1 (100%)
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
Tlr8NP_001094479.1 PRK15370 <21..>218 CDD:185268 48/205 (23%)
leucine-rich repeat 62..85 CDD:275380 6/25 (24%)
leucine-rich repeat 86..119 CDD:275380 10/45 (22%)
leucine-rich repeat 120..140 CDD:275380 9/22 (41%)
PLN00113 141..>664 CDD:215061 143/567 (25%)
leucine-rich repeat 141..164 CDD:275380 8/22 (36%)
leucine-rich repeat 165..194 CDD:275380 5/28 (18%)
leucine-rich repeat 195..215 CDD:275380 4/25 (16%)
leucine-rich repeat 216..239 CDD:275380 8/22 (36%)
leucine-rich repeat 240..280 CDD:275380 11/56 (20%)
leucine-rich repeat 281..304 CDD:275380 5/22 (23%)
leucine-rich repeat 305..324 CDD:275380 6/18 (33%)
leucine-rich repeat 331..387 CDD:275380 15/55 (27%)
leucine-rich repeat 388..411 CDD:275380 6/22 (27%)
leucine-rich repeat 467..494 CDD:275380 5/26 (19%)
leucine-rich repeat 495..510 CDD:275380 6/18 (33%)
leucine-rich repeat 520..543 CDD:275380 5/22 (23%)
leucine-rich repeat 544..573 CDD:275380 11/34 (32%)
leucine-rich repeat 574..597 CDD:275380 5/22 (23%)
leucine-rich repeat 598..628 CDD:275380 10/33 (30%)
PRK15370 <629..>739 CDD:185268 35/133 (26%)
leucine-rich repeat 629..653 CDD:275380 7/23 (30%)
leucine-rich repeat 654..677 CDD:275380 3/22 (14%)
leucine-rich repeat 678..701 CDD:275380 9/22 (41%)
leucine-rich repeat 702..725 CDD:275380 9/44 (20%)
leucine-rich repeat 726..745 CDD:275380 6/18 (33%)
PCC 730..>813 CDD:188093 22/83 (27%)
TIR 868..1004 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 155 1.000 Inparanoid score I4210
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.960

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