DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4168 and lrig1

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:XP_688817.4 Gene:lrig1 / 560325 ZFINID:ZDB-GENE-031113-23 Length:1022 Species:Danio rerio


Alignment Length:639 Identity:157/639 - (24%)
Similarity:267/639 - (41%) Gaps:149/639 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   408 EGLTETLEYLDLERNRLTTVPV-ALSSLHHLKYLYLTSNQISQLNNLPSFTE---NLRVLSLSGN 468
            :.|.::..:|:|..|:||.|.: .||:|.||:.:.|..|   :|.::|||.:   ::..|.|..|
Zfish    55 QDLPKSTVHLNLSHNKLTAVDMDILSNLPHLREVRLDHN---ELTSIPSFGDAAASVVTLLLHHN 116

  Fly   469 NFSMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLE 533
            ....:....|:|::.|..|::..|.||::.|..|.:   |..::.:.|.:|||.||..|:     
Zfish   117 RIRRLEGSLLQNFSALETLDLSNNDITELREHCFPL---GLQIKDLHLSSNKIVHLEFGA----- 173

  Fly   534 QIQEISLSFNDITIHHPLVFENVSRTLKILELS---FAVFPARSLESLDPLDALLPLSQLIWLGL 595
                               |:|::.:|:||.||   ....|.:.||          |.:|..|.|
Zfish   174 -------------------FKNLAGSLQILRLSRNRLTHLPVKGLE----------LPKLTQLEL 209

  Fly   596 DNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHS 660
            ..|.|:.:...:|..:..|..:.|..|.:..|..|.|...|...::.:|  ||.|..:.:.:.:.
Zfish   210 SRNRLRLIEGLTFQGLSSLEVLKLQRNNISKLTDGAFWGLARMRVLHLD--YNSLREVNSGSLYG 272

  Fly   661 LGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSL 725
            |..|..|.|.:|.:.......:...|.||.|:||||.|..:|.|:|..|.||.:|.|.||.:   
Zfish   273 LESLLQLYLANNSISNFNPEGWGFCERLRELNLSYNNLTKLSEGSFAKLVNLISLRLGHNSI--- 334

  Fly   726 SLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMYIYQLDISHNHVTKSDSFTNLANTLRFLNL 790
                                                        :|:|:. :|..| ::||.|.|
Zfish   335 --------------------------------------------SHITEG-AFRGL-SSLRTLEL 353

  Fly   791 AHNQL-GSLQ--SHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFS 852
            .||.: |:::  |.||..||.|..|.:..|.:.|:.:::|.||.:|:.|:|..|.:..:|.|.||
Zfish   354 DHNDISGTIEDTSGAFTGLENLNKLTLFGNKIKSVAKKAFSGLEALEHLNLGENAIRSIQPEAFS 418

  Fly   853 NLRKLRILRINSNRLRALPREVFMNTRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEY 917
            .::.||.|.|.|:..                 :.:.||..:|....|. |.. ..:|.:..:.|.
Zfish   419 KMKNLRYLHIQSDSF-----------------LCDCQLHWFPDWLLTR-GLN-PGVQATCAHPES 464

  Fly   918 LDASMFINS---QFLYDISLARNRITILPDNTFSFLN-----NLTNLDLSQNPLVTTNLREVFVH 974
            |..:....:   .|:.| .|.:.:||:.|..|.:.|.     ..|....|.:|:..|.|::    
Zfish   465 LKGTSIYQAPPQSFVCD-DLPKPQITVHPVTTAAVLGKDVRLTCTAASSSSSPMTFTWLKD---- 524

  Fly   975 TPRLRKLSLHHMGLYVLPPLKLPLLSYLDVSGNYLQELSPLGSLRHLRHVNVSH 1028
            ...||:..:.:             .:::..|...:.|.:   ::.|||||..:|
Zfish   525 QETLRQAEVEN-------------FAHVRASDGGVMEYT---TILHLRHVTFNH 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566
LRR_RI 122..350 CDD:238064
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
LRR_8 265..322 CDD:290566
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR_RI 315..546 CDD:238064 38/141 (27%)
leucine-rich repeat 339..365 CDD:275380
LRR_8 365..424 CDD:290566 4/15 (27%)
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380 1/3 (33%)
LRR_8 413..470 CDD:290566 20/60 (33%)
leucine-rich repeat 414..436 CDD:275380 9/22 (41%)
leucine-rich repeat 437..459 CDD:275380 7/24 (29%)
leucine-rich repeat 460..483 CDD:275380 5/22 (23%)
LRR_8 482..545 CDD:290566 15/62 (24%)
leucine-rich repeat 484..510 CDD:275380 8/25 (32%)
leucine-rich repeat 511..534 CDD:275380 7/22 (32%)
leucine-rich repeat 535..589 CDD:275380 11/56 (20%)
LRR_RI 588..891 CDD:238064 78/305 (26%)
LRR_8 588..650 CDD:290566 16/61 (26%)
leucine-rich repeat 590..613 CDD:275380 6/22 (27%)
leucine-rich repeat 614..639 CDD:275380 7/24 (29%)
LRR_8 638..698 CDD:290566 17/59 (29%)
leucine-rich repeat 640..663 CDD:275380 5/22 (23%)
leucine-rich repeat 664..687 CDD:275380 4/22 (18%)
LRR_8 688..749 CDD:290566 18/60 (30%)
leucine-rich repeat 688..711 CDD:275380 12/22 (55%)
leucine-rich repeat 712..735 CDD:275380 5/22 (23%)
leucine-rich repeat 740..783 CDD:275380 4/42 (10%)
LRR_8 784..843 CDD:290566 23/61 (38%)
leucine-rich repeat 785..808 CDD:275380 11/25 (44%)
leucine-rich repeat 809..832 CDD:275380 7/22 (32%)
LRR_RI <827..1053 CDD:238064 47/210 (22%)
LRR_8 832..890 CDD:290566 13/57 (23%)
leucine-rich repeat 833..856 CDD:275380 8/22 (36%)
leucine-rich repeat 857..879 CDD:275380 5/21 (24%)
leucine-rich repeat 880..900 CDD:275380 3/19 (16%)
LRR_8 904..963 CDD:290566 13/66 (20%)
leucine-rich repeat 905..928 CDD:275380 3/25 (12%)
leucine-rich repeat 929..952 CDD:275380 7/27 (26%)
leucine-rich repeat 953..977 CDD:275380 5/23 (22%)
leucine-rich repeat 978..1020 CDD:275380 4/41 (10%)
LRR_8 1019..1074 CDD:290566 6/10 (60%)
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
lrig1XP_688817.4 LRRNT 31..63 CDD:214470 1/7 (14%)
leucine-rich repeat 63..84 CDD:275380 9/20 (45%)
LRR_RI 77..334 CDD:238064 83/298 (28%)
LRR_8 83..142 CDD:290566 16/61 (26%)
leucine-rich repeat 85..107 CDD:275380 7/24 (29%)
leucine-rich repeat 108..131 CDD:275380 5/22 (23%)
LRR_8 132..191 CDD:290566 22/85 (26%)
leucine-rich repeat 132..155 CDD:275380 8/25 (32%)
leucine-rich repeat 156..180 CDD:275380 9/47 (19%)
leucine-rich repeat 181..203 CDD:275380 9/31 (29%)
LRR_8 202..262 CDD:290566 16/61 (26%)
leucine-rich repeat 204..227 CDD:275380 6/22 (27%)
leucine-rich repeat 228..251 CDD:275380 6/22 (27%)
LRR_8 251..310 CDD:290566 17/60 (28%)
leucine-rich repeat 252..275 CDD:275380 5/24 (21%)
leucine-rich repeat 276..299 CDD:275380 4/22 (18%)
LRR_8 299..358 CDD:290566 28/107 (26%)
leucine-rich repeat 300..323 CDD:275380 12/22 (55%)
leucine-rich repeat 324..347 CDD:275380 9/71 (13%)
leucine-rich repeat 348..372 CDD:275380 10/23 (43%)
LRR_4 373..414 CDD:289563 12/40 (30%)
LRR_8 374..433 CDD:290566 20/58 (34%)
leucine-rich repeat 375..398 CDD:275380 7/22 (32%)
leucine-rich repeat 399..420 CDD:275380 8/20 (40%)
LRRCT 433..481 CDD:214507 9/66 (14%)
Ig_3 485..572 CDD:290638 20/98 (20%)
IG_like 492..586 CDD:214653 18/91 (20%)
I-set 590..680 CDD:254352
Ig_1 607..681 CDD:143240
I-set 684..771 CDD:254352
IGc2 698..761 CDD:197706
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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