DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and Tl

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster


Alignment Length:998 Identity:213/998 - (21%)
Similarity:354/998 - (35%) Gaps:340/998 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   410 LTETLEYLDLERN-RLTTV--------------PVALSSLHHLKY--------------LYLTSN 445
            ||:|.:|..|.:. |:..|              |:| |.|.:|..              :.:|..
  Fly    81 LTDTTDYQQLPKKLRIGEVDRVQMRRCMLPGHTPIA-SILDYLGIVSPTTLIFESDNLGMNITRQ 144

  Fly   446 QISQLNNLPSFTENLRVLSLSGNNFSMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSN 510
            .:.:|:.|..|....|.|       :.||...|.:...||:|.:..| |.::|..:|  |.. .|
  Fly   145 HLDRLHGLKRFRFTTRRL-------THIPANLLTDMRNLSHLELRAN-IEEMPSHLF--DDL-EN 198

  Fly   511 LQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIHHPLV---FENVSRTLKILELSFAVFPA 572
            |::|...:||:..:..|.|..:.::::::|..|.:   |.|.   ||..:..             
  Fly   199 LESIEFGSNKLRQMPRGIFGKMPKLKQLNLWSNQL---HNLTKHDFEGATSV------------- 247

  Fly   573 RSLESLDPLDALLPLSQLIWLGLD--NNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSD 635
                                ||:|  :|.::|:.::.||.:..::.||||.|..::||:|||  |
  Fly   248 --------------------LGIDIHDNGIEQLPHDVFAHLTNVTDINLSANLFRSLPQGLF--D 290

  Fly   636 AHSHLVEIDLSYN--GLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRL 698
            .:.||.|:.|..|  .|..|.::.|.:..:||.|.|:: .|:::....|.:...:..:.|..|.|
  Fly   291 HNKHLNEVRLMNNRVPLATLPSRLFANQPELQILRLRA-ELQSLPGDLFEHSTQITNISLGDNLL 354

  Fly   699 VNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMYIY 763
            ..:.........||.:|||.:|:|..|....|.:.:|.|                          
  Fly   355 KTLPATLLEHQVNLLSLDLSNNRLTHLPDSLFAHTTNLT-------------------------- 393

  Fly   764 QLDISHNHVT--KSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRS 826
            .|.:..|.:|  ..|.|:||.|                         |..|.::.|.|.::..|:
  Fly   394 DLRLEDNLLTGISGDIFSNLGN-------------------------LVTLVMSRNRLRTIDSRA 433

  Fly   827 FQGLNSLQELDLSHNQLD----------QLQVEQ-FSNLRKLRILRINSNRLRALPREVFM---- 876
            |...|.|:.|.|.||.:|          |.|:.. |..:..|..|.:.:|.:      :|:    
  Fly   434 FVSTNGLRHLHLDHNDIDLQQPLLDIMLQTQINSPFGYMHGLLTLNLRNNSI------IFVYNDW 492

  Fly   877 -NTRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNN---LEYLDASMFINSQFLYDISLARN 937
             ||.|:                       ||.:.:|:||   |.|.|.: |::...|: :::..|
  Fly   493 KNTMLQ-----------------------LRELDLSYNNISSLGYEDLA-FLSQNRLH-VNMTHN 532

  Fly   938 RI--TILPDNTF---SFLNNLTNLDLSQNPLVTTNLREVF------VHTPRL-RKLSLHHMGLYV 990
            :|  ..||::..   .:.|||.::||:.||||.......|      ||.|:. |:..|....|..
  Fly   533 KIRRIALPEDVHLGEGYNNNLVHVDLNDNPLVCDCTILWFIQLVRGVHKPQYSRQFKLRTDRLVC 597

  Fly   991 LPPLKL-----------PLLSYLDVSGNYLQELSPLGSLRHLRHVNVSHNKLTNASCAAEHLPPS 1044
            ..|..|           .|:..||.|.:..:...|.|...|:|    :::|....:|.:.     
  Fly   598 SQPNVLEGTPVRQIEPQTLICPLDFSDDPRERKCPRGCNCHVR----TYDKALVINCHSG----- 653

  Fly  1045 VRVLDLAHNPLRRITLHDLASLRHLAELNILDVKVTNPQAFSKLRSLRKLHASSHANLGEIVARI 1109
                :|.|.| |...||                         |...|.:||..::..|....|..
  Fly   654 ----NLTHVP-RLPNLH-------------------------KNMQLMELHLENNTLLRLPSANT 688

  Fly  1110 PGLQQLRVHCLEPNIGQQLFAKLANNTKIRLLELYGSNVQTIAPDVFTGLSRSQRLQVKISHTRI 1174
            ||.:                       .:..|.|.|:|:.:|..|         :|...::|   
  Fly   689 PGYE-----------------------SVTSLHLAGNNLTSIDVD---------QLPTNLTH--- 718

  Fly  1175 SDLPPGIFYALREVPHLSIDISHNRINALAAD--SFYPNKSYWDAVGTRSIMGGLITSHNPLECE 1237
                              :|||.|.:..|.|.  .|......|     ||:.    .|.||..|:
  Fly   719 ------------------LDISWNHLQMLNATVLGFLNRTMKW-----RSVK----LSGNPWMCD 756

  Fly  1238 CGLVWFGHWLRRWLRESAQIKVIQKDDLKRMVQRARANTCHD---PTSGRHLPILEIFPED---L 1296
            |              .:..:.:..:|:.:|:..| ....|.:   ||....|...:|.|.:   .
  Fly   757 C--------------TAKPLLLFTQDNFERIGDR-NEMMCVNAEMPTRMVELSTNDICPAEKGVF 806

  Fly  1297 LCQASALSSSGQRIFLLSFAMAL 1319
            :..|..::.:|   .|..|..||
  Fly   807 IALAVVIALTG---LLAGFTAAL 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566
LRR_RI 122..350 CDD:238064
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
LRR_8 265..322 CDD:290566
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR_RI 315..546 CDD:238064 38/164 (23%)
leucine-rich repeat 339..365 CDD:275380
LRR_8 365..424 CDD:290566 5/14 (36%)
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380 1/1 (100%)
LRR_8 413..470 CDD:290566 16/85 (19%)
leucine-rich repeat 414..436 CDD:275380 8/36 (22%)
leucine-rich repeat 437..459 CDD:275380 5/35 (14%)
leucine-rich repeat 460..483 CDD:275380 5/22 (23%)
LRR_8 482..545 CDD:290566 17/62 (27%)
leucine-rich repeat 484..510 CDD:275380 8/25 (32%)
leucine-rich repeat 511..534 CDD:275380 6/22 (27%)
leucine-rich repeat 535..589 CDD:275380 6/56 (11%)
LRR_RI 588..891 CDD:238064 77/324 (24%)
LRR_8 588..650 CDD:290566 23/65 (35%)
leucine-rich repeat 590..613 CDD:275380 7/24 (29%)
leucine-rich repeat 614..639 CDD:275380 11/24 (46%)
LRR_8 638..698 CDD:290566 16/61 (26%)
leucine-rich repeat 640..663 CDD:275380 7/24 (29%)
leucine-rich repeat 664..687 CDD:275380 6/22 (27%)
LRR_8 688..749 CDD:290566 14/60 (23%)
leucine-rich repeat 688..711 CDD:275380 3/22 (14%)
leucine-rich repeat 712..735 CDD:275380 8/22 (36%)
leucine-rich repeat 740..783 CDD:275380 7/44 (16%)
LRR_8 784..843 CDD:290566 12/58 (21%)
leucine-rich repeat 785..808 CDD:275380 0/22 (0%)
leucine-rich repeat 809..832 CDD:275380 6/22 (27%)
LRR_RI <827..1053 CDD:238064 61/267 (23%)
LRR_8 832..890 CDD:290566 16/73 (22%)
leucine-rich repeat 833..856 CDD:275380 9/33 (27%)
leucine-rich repeat 857..879 CDD:275380 5/26 (19%)
leucine-rich repeat 880..900 CDD:275380 1/19 (5%)
LRR_8 904..963 CDD:290566 20/66 (30%)
leucine-rich repeat 905..928 CDD:275380 9/25 (36%)
leucine-rich repeat 929..952 CDD:275380 5/27 (19%)
leucine-rich repeat 953..977 CDD:275380 10/29 (34%)
leucine-rich repeat 978..1020 CDD:275380 11/53 (21%)
LRR_8 1019..1074 CDD:290566 10/54 (19%)
leucine-rich repeat 1045..1068 CDD:275380 6/22 (27%)
leucine-rich repeat 1069..1090 CDD:275380 1/20 (5%)
leucine-rich repeat 1091..1114 CDD:275380 7/22 (32%)
leucine-rich repeat 1115..1161 CDD:275380 6/45 (13%)
leucine-rich repeat 1162..1190 CDD:275380 2/27 (7%)
TlNP_001262995.1 LRR_8 174..233 CDD:290566 17/62 (27%)
leucine-rich repeat 176..198 CDD:275380 8/25 (32%)
leucine-rich repeat 199..222 CDD:275380 6/22 (27%)
LRR_RI 216..542 CDD:238064 98/446 (22%)
LRR_8 221..281 CDD:290566 18/95 (19%)
leucine-rich repeat 223..270 CDD:275380 13/82 (16%)
leucine-rich repeat 271..294 CDD:275380 11/24 (46%)
leucine-rich repeat 295..320 CDD:275380 7/24 (29%)
leucine-rich repeat 321..343 CDD:275380 6/22 (27%)
LRR_8 342..402 CDD:290566 16/85 (19%)
leucine-rich repeat 344..367 CDD:275380 3/22 (14%)
leucine-rich repeat 368..391 CDD:275380 8/22 (36%)
LRR_8 390..450 CDD:290566 22/110 (20%)
leucine-rich repeat 392..415 CDD:275380 8/48 (17%)
leucine-rich repeat 416..439 CDD:275380 6/22 (27%)
leucine-rich repeat 440..474 CDD:275380 9/33 (27%)
leucine-rich repeat 475..498 CDD:275380 6/28 (21%)
LRR_8 477..534 CDD:290566 17/87 (20%)
leucine-rich repeat 499..520 CDD:275380 8/21 (38%)
leucine-rich repeat 523..552 CDD:275380 5/29 (17%)
LRRCT 561..619 CDD:214507 14/57 (25%)
LRRNT 631..667 CDD:214470 12/74 (16%)
leucine-rich repeat 664..693 CDD:275380 10/76 (13%)
LRR_8 669..726 CDD:290566 19/109 (17%)
leucine-rich repeat 694..715 CDD:275380 7/29 (24%)
leucine-rich repeat 716..737 CDD:275380 7/41 (17%)
LRRCT 751..800 CDD:214507 12/63 (19%)
TIR 858..996 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453638
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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