DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and atk

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_001262113.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster


Alignment Length:1155 Identity:285/1155 - (24%)
Similarity:475/1155 - (41%) Gaps:269/1155 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 GGSIEVVSQNDNSSQ-PSSLAAVQTRLE-------TSNSIYPPSPSSGDRTTGGRPFEQLQKLLW 268
            |..|::...:.|..| ...|.||:..::       ..|:..|..|        ||.|..|| ::.
  Fly    37 GKEIQIWCSHSNLPQIMDGLKAVERNIKGRIDELVLENNQLPALP--------GRFFGSLQ-IVR 92

  Fly   269 LDLSNNRIYHVAGNYLPRSLVTMDLSSNLLTVF---PQQLFEQLPELRIVSLRDNLIRSVQWKEL 330
            |.|.:|.|..|:..:|      .:|.:.|:.:|   ||  ...:|...:..:.:.|..::|.:||
  Fly    93 LMLRHNSIERVSNGWL------NELENGLVEIFVVEPQ--LRSIPAESLNGMINMLAITIQSEEL 149

  Fly   331 QVRPLRMHLERLDLGQNCIENLESDYFQQNYSD-VHLRALNLEQNFVTQLPEAVFK-ATGIAHL- 392
            :..|                         ::|. :.|..|:::...:.:||..:|: ...:.|: 
  Fly   150 KHLP-------------------------DFSGLLSLTYLSVQTGALQELPSHLFRHLPKLQHIH 189

  Fly   393 VLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVPVALSSLHHLKYLYLTSNQISQLNNLPSFT 457
            :...:.::|:....|:||. :|:.|||..|.|..:        ||:.|       |:|.||.|  
  Fly   190 ITGGSGLTRLEAGLFDGLI-SLKNLDLSHNGLNWI--------HLRAL-------SRLPNLVS-- 236

  Fly   458 ENLRVLSLSGNNFSMIPVLG--LKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNK 520
                 |.||.|..|.:.::|  :|:...|..|.:..|.||.|.:|.| ||.  .||..:.|.:|:
  Fly   237 -----LKLSHNQISDVGMVGRIVKDLEHLKKLRLDNNLITVIEDGSF-VDL--PNLSELHLNDNR 293

  Fly   521 ITHLHLGSFAGLEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAVFPA-----RSLESLDP 580
            ||.|..|:|....|::.|.|..|.|...||         ..:|:.|.:...|     ..:..::.
  Fly   294 ITELQYGAFLRTPQLKTIYLQNNLIRRIHP---------ESLLQASGSGVEAVHMYNNEIGHVEA 349

  Fly   581 LDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDL 645
            |.|||.                       .:..|.|:::|.|.|..||.|..:  .|..|.::.|
  Fly   350 LRALLD-----------------------ALPRLRYLDMSGNLLSELPYGALR--GHGTLEQLHL 389

  Fly   646 SYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLP 710
            ::|.|..:|.....::..|:.|.:::|.|.:.....|.||..|:.|||:.|:...:.......||
  Fly   390 NHNHLRLIERDALMAMPALRELRMRNNSLSSDLPLPFWNLPGLKGLDLAQNQFARVDSQLLAGLP 454

  Fly   711 NLAALDLMHNQLCSLSLKSFLYVSNTTTPL--RLNVSHNHIASFYDELSSYM-YIYQLDISHNHV 772
            :|..|||..|.|..|:..||.:     .||  .||:|.|.:...:.....:: .::::|.|:|.:
  Fly   455 SLRRLDLSENGLIELAPNSFRH-----NPLLETLNISSNELTKIHSSTLIHLERLFEVDASYNQL 514

  Fly   773 ---------------TKSDSFTNL---------ANTLRFLNLAHNQLGSLQSHAFGDLEFLEILN 813
                           .|.:..|:|         ...||.|:|:.|::..|..|.|.....|.:|:
  Fly   515 KSVIAGLPRIVERISLKGNQITSLPAAASKDLQLPNLRMLDLSQNRIEQLPRHGFQGAMELRVLS 579

  Fly   814 VAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFM-N 877
            :|.|.|..|:..||.|:..|:.|.|..|||.:........|.:||.|.:.||:|.|:....|. |
  Fly   580 LAQNELRQLKDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNN 644

  Fly   878 TRLEFLDIAENQL-SVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFI-NSQFLYDISLARNRIT 940
            :|||.||::.|.: |:.|. || |...:|..:.:|.|.|  ||.|:.: |...|.||.|:.|:|:
  Fly   645 SRLEQLDLSRNLIRSISPT-AF-DTQRSLEYLDLSGNAL--LDISVGLGNLNNLRDIDLSYNQIS 705

  Fly   941 ILPDNTFSFLNNLTNLDLSQNPLVTTNLREVFVHTPRLRKLSLHHMGLYVLPPLKLPLLSYLDVS 1005
            .:..:......|:..:.||.|.:|     |:...|.|                 .||.|.|||:|
  Fly   706 RIQSDVIGGWRNVVEIRLSNNLIV-----ELQQGTFR-----------------NLPKLQYLDLS 748

  Fly  1006 GNYLQELSP--LGSLRHLRHVNVSHNKLTNASCAAEHLPPSVRVLDLAHNPLRRITLHDLASLRH 1068
            .|.::.:.|  |..|..|:...::.|||...........||:......:|.||.|:.....:...
  Fly   749 SNEIRNVEPGALKGLDELQEFVLADNKLVELKDHVFEELPSLLASHFQYNKLRYISPESFHNANS 813

  Fly  1069 LAELNILDVKVTNPQAFSKLRSLRKLHASSHANLG-EIVARIPGLQQLRVHCLEPNIGQQLFAKL 1132
            |..||:.:....|.:... |||:|.|.....:..| ::|:.:| |:.|       |...:|  |:
  Fly   814 LVFLNLSNNHFRNMENIG-LRSMRNLEVLDLSTNGVKLVSTMP-LKAL-------NWLVEL--KM 867

  Fly  1133 ANNTKIRLLELYGSNVQTIAPDVFTGLSRSQRLQVKISHTRISDLPPGIFYALREVPHLSIDISH 1197
            .||   ::..:.||..:|:           .||:|                         :.:.:
  Fly   868 DNN---QICRIQGSPFETM-----------PRLRV-------------------------LSMRN 893

  Fly  1198 NRINALAADSFYPNKSYWDAVGTRSIMGG---LITSHNPLECECGLVWFGHWLRRWLRESAQIKV 1259
            |::.::...:|            |::.|.   |....||::|.|.:    .||..||:|:.....
  Fly   894 NQLRSIKERTF------------RNVRGNIAILDVDGNPIDCNCEM----QWLSVWLQETNFPYP 942

  Fly  1260 IQKDDLKRMVQRAR--ANTC-------HDPTSGRHLPIL----EIFPEDL 1296
            ..|....|:::.||  .:.|       ::.|.|..||:|    ::|..||
  Fly   943 GPKCQDGRLLRSARMERSLCVGADIYGNERTDGNQLPLLNEHGDVFQRDL 992

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566
LRR_RI 122..350 CDD:238064 32/148 (22%)
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380 1/1 (100%)
leucine-rich repeat 215..236 CDD:275380 6/21 (29%)
LRR_8 265..322 CDD:290566 12/59 (20%)
leucine-rich repeat 266..287 CDD:275380 6/20 (30%)
leucine-rich repeat 288..311 CDD:275380 5/25 (20%)
leucine-rich repeat 312..338 CDD:275380 5/25 (20%)
LRR_RI 315..546 CDD:238064 60/235 (26%)
leucine-rich repeat 339..365 CDD:275380 1/26 (4%)
LRR_8 365..424 CDD:290566 15/60 (25%)
leucine-rich repeat 366..388 CDD:275380 5/22 (23%)
leucine-rich repeat 389..412 CDD:275380 5/23 (22%)
LRR_8 413..470 CDD:290566 18/56 (32%)
leucine-rich repeat 414..436 CDD:275380 6/21 (29%)
leucine-rich repeat 437..459 CDD:275380 7/21 (33%)
leucine-rich repeat 460..483 CDD:275380 7/24 (29%)
LRR_8 482..545 CDD:290566 23/62 (37%)
leucine-rich repeat 484..510 CDD:275380 10/25 (40%)
leucine-rich repeat 511..534 CDD:275380 8/22 (36%)
leucine-rich repeat 535..589 CDD:275380 13/58 (22%)
LRR_RI 588..891 CDD:238064 88/331 (27%)
LRR_8 588..650 CDD:290566 12/61 (20%)
leucine-rich repeat 590..613 CDD:275380 0/22 (0%)
leucine-rich repeat 614..639 CDD:275380 9/24 (38%)
LRR_8 638..698 CDD:290566 17/59 (29%)
leucine-rich repeat 640..663 CDD:275380 5/22 (23%)
leucine-rich repeat 664..687 CDD:275380 7/22 (32%)
LRR_8 688..749 CDD:290566 22/62 (35%)
leucine-rich repeat 688..711 CDD:275380 6/22 (27%)
leucine-rich repeat 712..735 CDD:275380 9/22 (41%)
leucine-rich repeat 740..783 CDD:275380 11/69 (16%)
LRR_8 784..843 CDD:290566 21/58 (36%)
leucine-rich repeat 785..808 CDD:275380 8/22 (36%)
leucine-rich repeat 809..832 CDD:275380 9/22 (41%)
LRR_RI <827..1053 CDD:238064 68/230 (30%)
LRR_8 832..890 CDD:290566 22/58 (38%)
leucine-rich repeat 833..856 CDD:275380 7/22 (32%)
leucine-rich repeat 857..879 CDD:275380 9/22 (41%)
leucine-rich repeat 880..900 CDD:275380 9/20 (45%)
LRR_8 904..963 CDD:290566 18/59 (31%)
leucine-rich repeat 905..928 CDD:275380 8/23 (35%)
leucine-rich repeat 929..952 CDD:275380 6/22 (27%)
leucine-rich repeat 953..977 CDD:275380 6/23 (26%)
leucine-rich repeat 978..1020 CDD:275380 11/43 (26%)
LRR_8 1019..1074 CDD:290566 12/54 (22%)
leucine-rich repeat 1045..1068 CDD:275380 4/22 (18%)
leucine-rich repeat 1069..1090 CDD:275380 5/20 (25%)
leucine-rich repeat 1091..1114 CDD:275380 6/23 (26%)
leucine-rich repeat 1115..1161 CDD:275380 9/45 (20%)
leucine-rich repeat 1162..1190 CDD:275380 3/27 (11%)
atkNP_001262113.1 leucine-rich repeat 69..89 CDD:275380 6/27 (22%)
leucine-rich repeat 90..113 CDD:275380 7/28 (25%)
leucine-rich repeat 115..138 CDD:275380 5/24 (21%)
leucine-rich repeat 139..160 CDD:275380 6/45 (13%)
leucine-rich repeat 161..184 CDD:275380 5/22 (23%)
LRR_8 183..244 CDD:290566 23/83 (28%)
leucine-rich repeat 185..209 CDD:275380 5/24 (21%)
LRR_4 209..247 CDD:289563 19/59 (32%)
leucine-rich repeat 210..233 CDD:275380 11/37 (30%)
leucine-rich repeat 234..259 CDD:275380 9/31 (29%)
LRR_RI 250..492 CDD:238064 78/283 (28%)
LRR_8 259..318 CDD:290566 23/61 (38%)
leucine-rich repeat 260..283 CDD:275380 10/25 (40%)
leucine-rich repeat 284..307 CDD:275380 8/22 (36%)
leucine-rich repeat 308..359 CDD:275380 13/82 (16%)
leucine-rich repeat 334..348 CDD:275378 1/13 (8%)
LRR_8 358..418 CDD:290566 17/61 (28%)
leucine-rich repeat 360..383 CDD:275380 9/24 (38%)
leucine-rich repeat 384..407 CDD:275380 5/22 (23%)
LRR_8 406..466 CDD:290566 19/59 (32%)
leucine-rich repeat 408..431 CDD:275380 7/22 (32%)
leucine-rich repeat 432..455 CDD:275380 6/22 (27%)
LRR_RI 447..705 CDD:238064 80/266 (30%)
LRR_8 454..514 CDD:290566 19/64 (30%)
leucine-rich repeat 456..476 CDD:275380 9/19 (47%)
leucine-rich repeat 480..501 CDD:275380 4/20 (20%)
leucine-rich repeat 505..517 CDD:275378 3/11 (27%)
leucine-rich repeat 525..550 CDD:275380 3/24 (13%)
LRR_8 549..609 CDD:290566 21/59 (36%)
leucine-rich repeat 551..574 CDD:275380 8/22 (36%)
leucine-rich repeat 575..598 CDD:275380 9/22 (41%)
leucine-rich repeat 599..622 CDD:275380 7/22 (32%)
LRR_8 622..681 CDD:290566 23/60 (38%)
leucine-rich repeat 623..646 CDD:275380 9/22 (41%)
LRR_RI 647..896 CDD:238064 79/324 (24%)
leucine-rich repeat 647..670 CDD:275380 10/24 (42%)
leucine-rich repeat 671..693 CDD:275380 8/23 (35%)
leucine-rich repeat 694..717 CDD:275380 6/22 (27%)
LRR_8 716..776 CDD:290566 21/81 (26%)
leucine-rich repeat 718..741 CDD:275380 8/44 (18%)
leucine-rich repeat 742..763 CDD:275380 8/20 (40%)
LRR_8 765..824 CDD:290566 13/58 (22%)
leucine-rich repeat 766..789 CDD:275380 4/22 (18%)
leucine-rich repeat 790..813 CDD:275380 4/22 (18%)
leucine-rich repeat 814..835 CDD:275380 6/21 (29%)
leucine-rich repeat 838..861 CDD:275380 6/30 (20%)
LRR_8 862..921 CDD:290566 16/111 (14%)
leucine-rich repeat 862..885 CDD:275380 7/38 (18%)
leucine-rich repeat 886..906 CDD:275380 4/56 (7%)
TPKR_C2 919..>946 CDD:301599 9/30 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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