DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and CG6749

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster


Alignment Length:671 Identity:145/671 - (21%)
Similarity:243/671 - (36%) Gaps:175/671 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 NLIRSVQWKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSDVHLRALNLEQNFVTQLPEAVF 384
            :|.:.:.|:..|...:....:.:|||            .:|:..:.:|  |::........|...
  Fly    27 DLCQPIGWRNFQCSEVASLQDLVDLG------------AENWHTLAIR--NVQTELEVGSGENAD 77

  Fly   385 KATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVP----VALSSLHHLKYLYLTSN 445
            ....:..|.|...|...||.:.| .:...|..|:|....|..:.    ...|:|..:.:   :.|
  Fly    78 HLANLLDLDLTGAAPINVHTNGF-SILPNLRQLNLSGCGLVDIRGNHFAPESALQRIDF---SHN 138

  Fly   446 QISQLNNLPSFTENLRVLSLSGNNFSMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSN 510
            |:..|:.  .|..|||.|..:..:.:.:....|.:...|:.|.:|:|.:.:...|:.      ..
  Fly   139 QMELLDR--DFFGNLRKLIYANFSHNALKQCDLPHMPLLNRLELGHNRLVNATFGVC------PQ 195

  Fly   511 LQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAVFPARSL 575
            ||.::|.:|::..|.:.:|.||..:.|:.||                                  
  Fly   196 LQELILNDNQLIQLDVNAFRGLHGLLELQLS---------------------------------- 226

  Fly   576 ESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAH--S 638
                                 .|.|..:..|:|..:.:|..:|||.|.|..|...:|.:..:  .
  Fly   227 ---------------------GNRLSSIGLETFQPLAQLRKLNLSQNALDALRPNVFGAVQNFVL 270

  Fly   639 HLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISH 703
            ||.::|||.|.:..|....|..|..||.|::..|.:.:::...|..|..||.|.|.||.::.|..
  Fly   271 HLQQLDLSGNRIRLLFDNQFRVLARLQMLDVSRNSIASLSPAHFVGLGSLRKLYLQYNAILEIKP 335

  Fly   704 GAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMYIYQLDIS 768
            ..|..|.||..|||.:|.|..|..:.|   ...|.|                             
  Fly   336 ATFAALLNLDTLDLSYNNLEFLEEQIF---GGNTLP----------------------------- 368

  Fly   769 HNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSL 833
                           .:|.|||..|::..|...||..|.|||.|.:.||.|.||..|.|..:..|
  Fly   369 ---------------RMRRLNLNGNRMKHLHPLAFSSLPFLEYLKLGHNELKSLDVRMFAPMRRL 418

  Fly   834 QELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNTRLEFLDIAENQLSVWPVPAF 898
            |:|.|.||.|:::.::...:|..::.:.:::|||..|.:.......|:.:.|..|.   |..|.|
  Fly   419 QKLHLGHNLLEEINLDVLESLSSVQEILVDNNRLTFLAKVNVSFPNLKRVAIEGNP---WQCPCF 480

  Fly   899 TDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTFSFLNNLTNLDLSQNPL 963
                     :::.|                    .||...:..|.|||..:        ..:.||
  Fly   481 ---------VKLQH--------------------WLATRDVVYLRDNTGYY--------KGERPL 508

  Fly   964 -VTTNLREVFVHTPRLRKLSL 983
             :.||:.....:...:|:|.:
  Fly   509 CIVTNVDYCIQNLQAVRRLGI 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566
LRR_RI 122..350 CDD:238064 6/29 (21%)
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
LRR_8 265..322 CDD:290566 0/1 (0%)
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380 3/17 (18%)
LRR_RI 315..546 CDD:238064 47/229 (21%)
leucine-rich repeat 339..365 CDD:275380 4/25 (16%)
LRR_8 365..424 CDD:290566 12/58 (21%)
leucine-rich repeat 366..388 CDD:275380 3/21 (14%)
leucine-rich repeat 389..412 CDD:275380 6/22 (27%)
LRR_8 413..470 CDD:290566 14/60 (23%)
leucine-rich repeat 414..436 CDD:275380 6/25 (24%)
leucine-rich repeat 437..459 CDD:275380 4/21 (19%)
leucine-rich repeat 460..483 CDD:275380 4/22 (18%)
LRR_8 482..545 CDD:290566 16/62 (26%)
leucine-rich repeat 484..510 CDD:275380 5/25 (20%)
leucine-rich repeat 511..534 CDD:275380 8/22 (36%)
leucine-rich repeat 535..589 CDD:275380 3/53 (6%)
LRR_RI 588..891 CDD:238064 82/304 (27%)
LRR_8 588..650 CDD:290566 18/63 (29%)
leucine-rich repeat 590..613 CDD:275380 4/22 (18%)
leucine-rich repeat 614..639 CDD:275380 8/26 (31%)
LRR_8 638..698 CDD:290566 21/59 (36%)
leucine-rich repeat 640..663 CDD:275380 8/22 (36%)
leucine-rich repeat 664..687 CDD:275380 6/22 (27%)
LRR_8 688..749 CDD:290566 20/60 (33%)
leucine-rich repeat 688..711 CDD:275380 9/22 (41%)
leucine-rich repeat 712..735 CDD:275380 8/22 (36%)
leucine-rich repeat 740..783 CDD:275380 0/42 (0%)
LRR_8 784..843 CDD:290566 26/58 (45%)
leucine-rich repeat 785..808 CDD:275380 9/22 (41%)
leucine-rich repeat 809..832 CDD:275380 10/22 (45%)
LRR_RI <827..1053 CDD:238064 32/158 (20%)
LRR_8 832..890 CDD:290566 15/57 (26%)
leucine-rich repeat 833..856 CDD:275380 8/22 (36%)
leucine-rich repeat 857..879 CDD:275380 4/21 (19%)
leucine-rich repeat 880..900 CDD:275380 6/19 (32%)
LRR_8 904..963 CDD:290566 7/58 (12%)
leucine-rich repeat 905..928 CDD:275380 1/22 (5%)
leucine-rich repeat 929..952 CDD:275380 6/22 (27%)
leucine-rich repeat 953..977 CDD:275380 4/24 (17%)
leucine-rich repeat 978..1020 CDD:275380 2/6 (33%)
LRR_8 1019..1074 CDD:290566
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 41/218 (19%)
LRR_8 104..164 CDD:290566 14/64 (22%)
leucine-rich repeat 106..129 CDD:275380 4/22 (18%)
leucine-rich repeat 130..153 CDD:275380 7/27 (26%)
leucine-rich repeat 154..195 CDD:275380 7/46 (15%)
LRR_RI 194..455 CDD:238064 89/362 (25%)
LRR_8 194..254 CDD:290566 20/114 (18%)
leucine-rich repeat 196..219 CDD:275380 8/22 (36%)
leucine-rich repeat 220..243 CDD:275380 7/77 (9%)
leucine-rich repeat 244..267 CDD:275380 8/22 (36%)
LRR_8 271..330 CDD:290566 21/58 (36%)
leucine-rich repeat 272..295 CDD:275380 8/22 (36%)
leucine-rich repeat 296..319 CDD:275380 6/22 (27%)
LRR_8 319..380 CDD:290566 25/107 (23%)
leucine-rich repeat 320..343 CDD:275380 9/22 (41%)
leucine-rich repeat 344..369 CDD:275380 10/71 (14%)
LRR_8 368..428 CDD:290566 27/103 (26%)
leucine-rich repeat 370..393 CDD:275380 9/22 (41%)
leucine-rich repeat 394..417 CDD:275380 10/22 (45%)
leucine-rich repeat 418..441 CDD:275380 8/22 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453501
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D299282at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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