DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and conv

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster


Alignment Length:1071 Identity:257/1071 - (23%)
Similarity:428/1071 - (39%) Gaps:290/1071 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 YACPLNSM----CQCA-----------------------------GLPNETSTLIEINCNEVALY 89
            :.||..|.    |:|.                             |:|.|..|:  ...:.|.||
  Fly    29 FKCPKKSKALYPCECVKGSDNGLYIRCENTNLATLSVALQNLASFGMPIEELTI--YRGHFVRLY 91

  Fly    90 KFPEFMHSSVRYIEMSNTHLQSVDDETFQGLR--LKTLKLIDNELQDISERSFSTM--------- 143
            . |.|.|...|.:.:..|.|.:::|..|.|:.  |:.|.|:...|..:....|..:         
  Fly    92 G-PLFAHIKARMLIIEETPLATIEDYVFYGVNNTLEQLHLLRTNLSHVGLLGFGILGKAKELVID 155

  Fly   144 -----------------THSLMTLDISGNKMQHLPLDALQRLHSLSRLVAQRNHITTLDGNWDAQ 191
                             .:||..:.::...:..||::..|.|..|..|....|.:..|..|   |
  Fly   156 GHAFQQLPKDLFAGQEIANSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRN---Q 217

  Fly   192 HDTLRSLHLSDNDITEVAPGGGSIEVVSQNDNSSQPSSLAAVQTRLETSNSIYPPSPSSGDRTTG 256
            ...||.|.:.|               :|.|...           :||..:               
  Fly   218 FKNLRELEVLD---------------ISHNQIK-----------KLEAQH--------------- 241

  Fly   257 GRPFEQLQKLLWLDLSNNRIYHVAGNYLPRS--LVTMDLSSNLLTVFPQQLFEQLPELRIVSLRD 319
               ...|.||.|.::|:|.:..::.....|:  |..:.||.|.:.......|..:..||.:.|.|
  Fly   242 ---IADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSD 303

  Fly   320 NLIRSVQWKELQVRPLRMHLER---LDLGQNCIENLESDYF-QQNYSDVHLRALNLEQNFVTQLP 380
            |::..:.      |.....:.|   :||.:|.::.:|...| |.||.::    |:|.:|.:|::.
  Fly   304 NVLTDIG------RGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVEL----LDLAENNITKIE 358

  Fly   381 EAVFKATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVPVALSSLHHLKYLYLTSN 445
            :..||....|.:.::.||:..:..:|||... .:..|||..|||..    .|.....:..:.|..
  Fly   359 KNSFKDIYQAIINVSHNALELIETAAFENCV-NITVLDLSHNRLAN----FSRRSFDETTFATYF 418

  Fly   446 QISQLNNLPSFTENLRVLSLSGNNFSMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSN 510
            |:| .|||              .|.:.||:   :|.|.|..||..|||||:||:..|.       
  Fly   419 QLS-YNNL--------------TNLAQIPI---QNMTGLKVLNASYNSITEIPKNCFP------- 458

  Fly   511 LQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAVFPARSL 575
                     |:..||           .|.:|.|:|:    .:|..|.:||            .||
  Fly   459 ---------KLYELH-----------TIDVSHNNIS----SIFNGVFQTL------------FSL 487

  Fly   576 ESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHL 640
            .|:|               |.:|:::::.:.:|.                |||.          |
  Fly   488 RSID---------------LSHNSMREIKSSTFG----------------TLPT----------L 511

  Fly   641 VEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGA 705
            :|:|||:|.|..:...:...|..|:.|.|.:|:|..:    |.....|..|..|:|||.||..|.
  Fly   512 LEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKL----FQLPISLNELYFSHNRLTNIPSGT 572

  Fly   706 FTVLPNLAALDLMHNQL-CSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMYIYQLDISH 769
            :.|:.:|..|||.|||| .:|:.:||                          :..:.:.:|.:.:
  Fly   573 WPVMNSLIYLDLSHNQLGDTLNGESF--------------------------TGLLVVQRLKLQN 611

  Fly   770 NHVTK--SDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNS 832
            |.:::  .|:.. :.:||::|:|.:|.:.:|:..|||.|..|..||:..|.:..:.:|:|:||..
  Fly   612 NGISQPPKDAVA-VMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQ 675

  Fly   833 LQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMN------TRLEFLDIAENQLS 891
            |..|:||.|.:..||.:.|..|..||.|.::.|.|..|..:.  |      ..||.||::.|::|
  Fly   676 LLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKT--NGVLDDLLSLETLDLSHNRIS 738

  Fly   892 V---WPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTFSFLNNL 953
            .   ...|:...|.:.||::.:|:|.:..|...:...::.|..:.::.|:|..|.....|...:|
  Fly   739 FVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNFTSL 803

  Fly   954 TNLDLSQNPLVTTNLR---EVFVHTPRLRKLSLHHMGLYVLP---PLKLPLLSYLDVSGNYLQEL 1012
            .:||:|.|.|  :||:   .:|.....|..|.|.|..:|.||   .:|:..|.|:|::.|.|:::
  Fly   804 QSLDMSYNEL--SNLKSEEHIFDLPQNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDV 866

  Fly  1013 --SPLGSLRHLRHVNVSHNKLTNASCAAEHL 1041
              |.:||:|:...|.::.|.| :..|.|..|
  Fly   867 PASIVGSMRNGSQVLLAGNPL-HCGCNARPL 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380 4/18 (22%)
LRR_8 121..181 CDD:290566 14/87 (16%)
LRR_RI 122..350 CDD:238064 47/258 (18%)
leucine-rich repeat 122..146 CDD:275380 5/49 (10%)
leucine-rich repeat 147..170 CDD:275380 5/22 (23%)
leucine-rich repeat 171..194 CDD:275380 6/22 (27%)
leucine-rich repeat 195..214 CDD:275380 4/18 (22%)
leucine-rich repeat 215..236 CDD:275380 2/20 (10%)
LRR_8 265..322 CDD:290566 16/58 (28%)
leucine-rich repeat 266..287 CDD:275380 4/20 (20%)
leucine-rich repeat 288..311 CDD:275380 5/22 (23%)
leucine-rich repeat 312..338 CDD:275380 6/25 (24%)
LRR_RI 315..546 CDD:238064 60/234 (26%)
leucine-rich repeat 339..365 CDD:275380 9/29 (31%)
LRR_8 365..424 CDD:290566 16/58 (28%)
leucine-rich repeat 366..388 CDD:275380 6/21 (29%)
leucine-rich repeat 389..412 CDD:275380 6/22 (27%)
LRR_8 413..470 CDD:290566 13/56 (23%)
leucine-rich repeat 414..436 CDD:275380 7/21 (33%)
leucine-rich repeat 437..459 CDD:275380 6/21 (29%)
leucine-rich repeat 460..483 CDD:275380 4/22 (18%)
LRR_8 482..545 CDD:290566 18/62 (29%)
leucine-rich repeat 484..510 CDD:275380 11/25 (44%)
leucine-rich repeat 511..534 CDD:275380 3/22 (14%)
leucine-rich repeat 535..589 CDD:275380 12/53 (23%)
LRR_RI 588..891 CDD:238064 83/311 (27%)
LRR_8 588..650 CDD:290566 12/61 (20%)
leucine-rich repeat 590..613 CDD:275380 3/22 (14%)
leucine-rich repeat 614..639 CDD:275380 3/24 (13%)
LRR_8 638..698 CDD:290566 18/59 (31%)
leucine-rich repeat 640..663 CDD:275380 8/22 (36%)
leucine-rich repeat 664..687 CDD:275380 6/22 (27%)
LRR_8 688..749 CDD:290566 21/61 (34%)
leucine-rich repeat 688..711 CDD:275380 10/22 (45%)
leucine-rich repeat 712..735 CDD:275380 11/23 (48%)
leucine-rich repeat 740..783 CDD:275380 3/44 (7%)
LRR_8 784..843 CDD:290566 23/58 (40%)
leucine-rich repeat 785..808 CDD:275380 9/22 (41%)
leucine-rich repeat 809..832 CDD:275380 8/22 (36%)
LRR_RI <827..1053 CDD:238064 69/232 (30%)
LRR_8 832..890 CDD:290566 21/63 (33%)
leucine-rich repeat 833..856 CDD:275380 9/22 (41%)
leucine-rich repeat 857..879 CDD:275380 7/27 (26%)
leucine-rich repeat 880..900 CDD:275380 7/22 (32%)
LRR_8 904..963 CDD:290566 15/58 (26%)
leucine-rich repeat 905..928 CDD:275380 5/22 (23%)
leucine-rich repeat 929..952 CDD:275380 5/22 (23%)
leucine-rich repeat 953..977 CDD:275380 9/26 (35%)
leucine-rich repeat 978..1020 CDD:275380 16/46 (35%)
LRR_8 1019..1074 CDD:290566 7/23 (30%)
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380 5/22 (23%)
leucine-rich repeat 150..175 CDD:275380 0/24 (0%)
leucine-rich repeat 176..199 CDD:275380 5/22 (23%)
LRR_8 198..258 CDD:290566 20/106 (19%)
leucine-rich repeat 200..223 CDD:275380 7/25 (28%)
LRR_RI 201..545 CDD:238064 114/507 (22%)
leucine-rich repeat 224..271 CDD:275380 13/90 (14%)
LRR_8 245..306 CDD:290566 17/60 (28%)
leucine-rich repeat 272..295 CDD:275380 5/22 (23%)
LRR_8 296..354 CDD:290566 18/67 (27%)
leucine-rich repeat 296..319 CDD:275380 6/28 (21%)
LRR_8 322..401 CDD:290566 24/83 (29%)
leucine-rich repeat 322..343 CDD:275380 6/20 (30%)
leucine-rich repeat 344..367 CDD:275380 6/26 (23%)
leucine-rich repeat 371..390 CDD:275380 5/19 (26%)
leucine-rich repeat 391..414 CDD:275380 7/26 (27%)
leucine-rich repeat 416..438 CDD:275380 10/39 (26%)
LRR_8 437..495 CDD:290566 28/115 (24%)
leucine-rich repeat 439..462 CDD:275380 12/38 (32%)
leucine-rich repeat 463..486 CDD:275380 10/49 (20%)
LRR_RI 486..738 CDD:238064 87/325 (27%)
LRR_8 486..545 CDD:290566 22/99 (22%)
leucine-rich repeat 487..510 CDD:275380 8/53 (15%)
leucine-rich repeat 511..534 CDD:275380 8/22 (36%)
leucine-rich repeat 535..554 CDD:275380 6/22 (27%)
LRR_8 554..614 CDD:290566 23/85 (27%)
leucine-rich repeat 555..578 CDD:275380 10/22 (45%)
leucine-rich repeat 579..603 CDD:275380 11/49 (22%)
leucine-rich repeat 604..627 CDD:275380 3/23 (13%)
LRR_8 626..710 CDD:290566 31/83 (37%)
leucine-rich repeat 628..649 CDD:275380 8/20 (40%)
leucine-rich repeat 652..672 CDD:275380 6/19 (32%)
LRR_8 698..765 CDD:290566 19/68 (28%)
leucine-rich repeat 700..726 CDD:275380 7/27 (26%)
leucine-rich repeat 727..745 CDD:275380 6/17 (35%)
LRR_8 777..839 CDD:290566 18/63 (29%)
leucine-rich repeat 779..802 CDD:275380 5/22 (23%)
leucine-rich repeat 829..852 CDD:275380 8/22 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4879
SonicParanoid 00.000 Not matched by this tool.
33.040

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