DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and Toll-4

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_523519.2 Gene:Toll-4 / 34235 FlyBaseID:FBgn0032095 Length:1125 Species:Drosophila melanogaster


Alignment Length:1017 Identity:216/1017 - (21%)
Similarity:375/1017 - (36%) Gaps:288/1017 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   416 YLD---------LERNRLTTVPVALSSLHHLKYLYLTSNQISQLNNLPSF--TENLRVLSLSGNN 469
            |||         :..|.:||....:.    |.:|.|..|..|     |.|  ....::.:.:...
  Fly    96 YLDELGENGTCSIANNEVTTEDYQMK----LVFLKLEINWTS-----PVFHGWNIFKICNETDYE 151

  Fly   470 FSMIPVLGLKNYTQL------SYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLH--- 525
            ..:|.|||:::...:      .||::         .||..:..:...|.::|:....:.|.:   
  Fly   152 LVIISVLGIRSEVDMRISPAVQYLSL---------LGIREISGYDIYLPSVLITEMDVHHANGPK 207

  Fly   526 -----------LGSFAGLEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAVFPARSLESLD 579
                       :.|......|::...:...|.|::...||..:.|::     ..:|..::     
  Fly   208 MVTFKYLYDSTVNSVITNNYIRKTMNNTEKIKIYYHNTFEKTTLTME-----KNIFHGKN----- 262

  Fly   580 PLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEID 644
                  .:|.||:.||....|...:.|:...:..|.:.|:....|..|.....||.....::::|
  Fly   263 ------KMSALIFNGLKIKGLTNNTFENLTSLNTLIFDNVFLKDLSFLRSSTLQSSLTYCIMKVD 321

  Fly   645 LSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVL 709
                  ..::.::|....:|:.:.:...:       .|.|  |..::...|.     ||..||:.
  Fly   322 ------NMVDLKSFEKFTNLEIIEVSQYK-------GFKN--FTAFICEPYK-----SHCKFTLG 366

  Fly   710 PNLAALDLMHNQLCSLSL-KSFLYV----SNTTTPLRLNV----------SHNHIASFYD-ELSS 758
            .|..|..|..|  ||.:. ||.|.:    .|.||...|.|          ..|.:|...| .|..
  Fly   367 INEVACPLKCN--CSYNRDKSQLEIDCWQKNLTTIPSLPVPKKGSSALVFQSNLLAELPDNSLEG 429

  Fly   759 YMYIYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNV--AHNNLTS 821
            |..:..||:|:|.:| |.|.:.|..:|.:|::.||::.:|....   :|:|..:||  .:.|..|
  Fly   430 YHNLKSLDVSYNQLT-SLSVSQLPESLHYLDIRHNKITTLSPQV---VEYLYSVNVFNQYGNKWS 490

  Fly   822 LRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNTRLEF---- 882
            :                   ..|:..:::|. ..|.::|||.:::.:.:...:.::::..|    
  Fly   491 I-------------------YCDEYHLQEFF-WYKAKLLRIKTSKFQTIMEYIELSSKGSFVENF 535

  Fly   883 ---------LDIAENQLSVWPVPAF--TDIGFTLRSIQMSHNNLEYLDASMF-------INSQFL 929
                     |:..|:::    :.||  :|..|.|:.:: :.|:..:|.:..|       :||...
  Fly   536 FVQNIDQLYLEANEDEI----IDAFGPSDKYFNLKLME-ALNHAIWLFSGEFDEIILHHLNSPCP 595

  Fly   930 YDISLARNRITILPDNTFSFLNNLTNLDLSQNPLVTTNL---REVFVHTPRLRKL---------- 981
            |..|..      ...:|..||.|..||.|...|.:..::   ..:::....:|||          
  Fly   596 YRCSCC------FEWHTGEFLINCRNLSLDIYPRLPNSIPYKTTLYLDRNEIRKLTNTESLVVAG 654

  Fly   982 --SLH--HMGLYVLPPLKLPLL----SYLDVSGNYLQELSPLGSLRHLRH-VNVSHNKLT----N 1033
              |:|  ||...:|..|.|.||    :||||..|.|:.|.. |.:..|.: .|::..:|:    .
  Fly   655 HASIHKLHMSQNLLRELPLHLLPENITYLDVRNNLLKYLDD-GVIAFLEYRENITKIELSGNPWE 718

  Fly  1034 ASCAAEHLPPSVRVLDLAHNP------LRRITLHDLASLRHLAELNILDVKVTNPQAFSKLRSLR 1092
            .:|.|:.....:|    .|.|      |||:.:.|    ....|..|..|..:|..:.:.:....
  Fly   719 CNCKAKAFLSFLR----RHEPMEYETVLRRVEITD----DKCPEDCICCVDTSNSDSLAYVVDCS 775

  Fly  1093 KLHASSHANLGEIVARIPGLQQLRVHCLEPNIGQQLFAKLANNTKIRLLELYGSNVQTIAPDVFT 1157
                      |:.::.||.|.       .|..||.......|:     |:.:.|:       :..
  Fly   776 ----------GKELSEIPQLP-------TPTYGQTTLVFERNS-----LKKWPSS-------LLP 811

  Fly  1158 GLSRSQRLQVKISHTRISD---LPPGIFYALREVPHLSIDISHNRINAL--AADSFYP---NKSY 1214
            |.|...|..  ::|.|:||   ||..:.|         :|||:|..:||  ....|..   |.|.
  Fly   812 GYSSVTRFY--LAHNRLSDIDQLPDKLEY---------LDISNNNFSALDDRVRGFLQKRMNSSQ 865

  Fly  1215 WDAVGTRSIMGGLITSHNPLECECGLVWFGHWLRRWLRESAQIKVIQKDDLKRMVQRARANTCHD 1279
            ...    |:.|      ||..|.|              |.....|..|:..|. :..|.|..|.|
  Fly   866 LQL----SLFG------NPWTCRC--------------EDKDFLVFVKEQAKN-IANASAIQCID 905

  Fly  1280 PTSGRHLPILEIFPEDLLCQASALSSSGQRIFLLSFAMALLI 1321
              :||.|  :|:...| :| .|.|      |:..|.|::|||
  Fly   906 --TGRSL--IEVEETD-IC-PSVL------IYYTSLAVSLLI 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566
LRR_RI 122..350 CDD:238064
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
LRR_8 265..322 CDD:290566
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR_RI 315..546 CDD:238064 26/160 (16%)
leucine-rich repeat 339..365 CDD:275380
LRR_8 365..424 CDD:290566 4/16 (25%)
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380
LRR_8 413..470 CDD:290566 13/64 (20%)
leucine-rich repeat 414..436 CDD:275380 6/28 (21%)
leucine-rich repeat 437..459 CDD:275380 7/23 (30%)
leucine-rich repeat 460..483 CDD:275380 4/22 (18%)
LRR_8 482..545 CDD:290566 9/82 (11%)
leucine-rich repeat 484..510 CDD:275380 4/31 (13%)
leucine-rich repeat 511..534 CDD:275380 4/36 (11%)
leucine-rich repeat 535..589 CDD:275380 7/53 (13%)
LRR_RI 588..891 CDD:238064 71/333 (21%)
LRR_8 588..650 CDD:290566 14/61 (23%)
leucine-rich repeat 590..613 CDD:275380 6/22 (27%)
leucine-rich repeat 614..639 CDD:275380 6/24 (25%)
LRR_8 638..698 CDD:290566 7/59 (12%)
leucine-rich repeat 640..663 CDD:275380 2/22 (9%)
leucine-rich repeat 664..687 CDD:275380 3/22 (14%)
LRR_8 688..749 CDD:290566 20/75 (27%)
leucine-rich repeat 688..711 CDD:275380 5/22 (23%)
leucine-rich repeat 712..735 CDD:275380 8/27 (30%)
leucine-rich repeat 740..783 CDD:275380 15/53 (28%)
LRR_8 784..843 CDD:290566 11/60 (18%)
leucine-rich repeat 785..808 CDD:275380 5/22 (23%)
leucine-rich repeat 809..832 CDD:275380 5/24 (21%)
LRR_RI <827..1053 CDD:238064 55/273 (20%)
LRR_8 832..890 CDD:290566 9/70 (13%)
leucine-rich repeat 833..856 CDD:275380 2/22 (9%)
leucine-rich repeat 857..879 CDD:275380 3/21 (14%)
leucine-rich repeat 880..900 CDD:275380 5/34 (15%)
LRR_8 904..963 CDD:290566 15/65 (23%)
leucine-rich repeat 905..928 CDD:275380 6/29 (21%)
leucine-rich repeat 929..952 CDD:275380 5/22 (23%)
leucine-rich repeat 953..977 CDD:275380 4/26 (15%)
leucine-rich repeat 978..1020 CDD:275380 20/59 (34%)
LRR_8 1019..1074 CDD:290566 13/65 (20%)
leucine-rich repeat 1045..1068 CDD:275380 7/28 (25%)
leucine-rich repeat 1069..1090 CDD:275380 4/20 (20%)
leucine-rich repeat 1091..1114 CDD:275380 4/22 (18%)
leucine-rich repeat 1115..1161 CDD:275380 7/45 (16%)
leucine-rich repeat 1162..1190 CDD:275380 8/30 (27%)
Toll-4NP_523519.2 leucine-rich repeat 264..287 CDD:275380 7/22 (32%)
leucine-rich repeat 288..308 CDD:275380 4/19 (21%)
leucine-rich repeat 309..334 CDD:275380 4/30 (13%)
leucine-rich repeat 335..386 CDD:275380 16/66 (24%)
leucine-rich repeat 388..408 CDD:275380 5/19 (26%)
LRR_8 412..465 CDD:290566 17/53 (32%)
leucine-rich repeat 412..432 CDD:275378 5/19 (26%)
LRR_4 432..470 CDD:289563 13/38 (34%)
leucine-rich repeat 433..454 CDD:275378 8/21 (38%)
leucine-rich repeat 455..478 CDD:275378 7/25 (28%)
leucine-rich repeat 479..490 CDD:275378 3/10 (30%)
leucine-rich repeat 632..657 CDD:275378 3/24 (13%)
leucine-rich repeat 658..679 CDD:275378 8/20 (40%)
leucine-rich repeat 680..706 CDD:275378 9/26 (35%)
leucine-rich repeat 707..719 CDD:275378 1/11 (9%)
leucine-rich repeat 771..791 CDD:275380 5/36 (14%)
leucine-rich repeat 793..815 CDD:275378 4/33 (12%)
leucine-rich repeat 816..835 CDD:275378 7/20 (35%)
leucine-rich repeat 836..859 CDD:275378 8/31 (26%)
TIR 974..1110 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453623
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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