DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4168 and Lrig3

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_796126.4 Gene:Lrig3 / 320398 MGIID:2443955 Length:1117 Species:Mus musculus


Alignment Length:620 Identity:153/620 - (24%)
Similarity:254/620 - (40%) Gaps:149/620 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 LDLERNRLTTVPVALSSLHHLKYLY---LTSNQISQLNNLPSFTENLRVLSLSGNNFSMIPVLGL 478
            |||..|||:.:..  |||.||:.|.   |.:|::..:.||.|.:.|:|.|||:||....|     
Mouse    79 LDLSHNRLSFIQT--SSLSHLQSLQEVKLNNNELETIPNLGSISANIRQLSLAGNAIDKI----- 136

  Fly   479 KNYTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFN 543
                              :||.:.|..|    |:|:.|.||.|:.|.. :|..| |::.:.::.|
Mouse   137 ------------------LPEQLEAFQS----LETLDLSNNNISELRT-AFPPL-QLKYLYINNN 177

  Fly   544 DITIHHPLVFENVSRTLKILELSFAVFPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSNESF 608
            .::...|..|:|::.||.:|:|:     ...:.::.|  .:..|.||..|.|:.|.:|.|...:|
Mouse   178 RVSSMEPGYFDNLASTLLVLKLN-----RNRISAIPP--KMFKLPQLQHLELNRNKIKNVDGLTF 235

  Fly   609 AQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNR 673
                                :||      ..|..:.:..||:.:|....|..|.:::.|.|..|.
Mouse   236 --------------------QGL------GALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNN 274

  Fly   674 LRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTT 738
            |..|.:...:.|..||.|.||.|.:..||..|:.....|:.|||..|.|..|...|||.:|....
Mouse   275 LTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNA 339

  Fly   739 PLRLNVSHNHIASFYDELSSYMYIYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLG---SLQS 800
               |::.:|.::            |..|.:...:|          :|:.|:|.:|::.   ...|
Mouse   340 ---LHIGNNKVS------------YIADCAFRGLT----------SLKTLDLRNNEISWTIEDMS 379

  Fly   801 HAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSN 865
            .||..|:.|..|.:..|.:.|:.:::|.||::|:.||||.|.:..||...||.::||:.|.:|::
Mouse   380 GAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTS 444

  Fly   866 ------RLRALPREVFMNTRLEFL--------------------------DIAENQLSVWPVPAF 898
                  :||.||:.|..|....|:                          |..:.|::|.|....
Mouse   445 SLLCDCQLRWLPQWVAENNFQSFVNASCAHPQLLKGRSIFTVSPDGFVCDDFPKPQITVQPETQS 509

  Fly   899 ----TDIGFTLRSIQMSHNNLEYL---------DASM----FINSQ----FLYDISLARNRITIL 942
                :|:.||..:...|.:.:.:.         ||.|    .:.:|    ..|...|....:...
Mouse   510 AIKGSDVSFTCSAASSSDSPMTFAWKKDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFT 574

  Fly   943 PDNTFS-FLNNLTNLDLSQNPLVTTNLREVFVHTP 976
            .:..:. .::|......|....:|.|:...|..||
Mouse   575 SEGKYQCVISNHFGSSYSVKAKLTINMLPSFTKTP 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566
LRR_RI 122..350 CDD:238064
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
LRR_8 265..322 CDD:290566
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR_RI 315..546 CDD:238064 40/131 (31%)
leucine-rich repeat 339..365 CDD:275380
LRR_8 365..424 CDD:290566 4/6 (67%)
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380
LRR_8 413..470 CDD:290566 24/55 (44%)
leucine-rich repeat 414..436 CDD:275380 9/18 (50%)
leucine-rich repeat 437..459 CDD:275380 7/24 (29%)
leucine-rich repeat 460..483 CDD:275380 7/22 (32%)
LRR_8 482..545 CDD:290566 15/62 (24%)
leucine-rich repeat 484..510 CDD:275380 4/25 (16%)
leucine-rich repeat 511..534 CDD:275380 9/22 (41%)
leucine-rich repeat 535..589 CDD:275380 10/53 (19%)
LRR_RI 588..891 CDD:238064 85/337 (25%)
LRR_8 588..650 CDD:290566 12/61 (20%)
leucine-rich repeat 590..613 CDD:275380 7/22 (32%)
leucine-rich repeat 614..639 CDD:275380 2/24 (8%)
LRR_8 638..698 CDD:290566 18/59 (31%)
leucine-rich repeat 640..663 CDD:275380 6/22 (27%)
leucine-rich repeat 664..687 CDD:275380 6/22 (27%)
LRR_8 688..749 CDD:290566 22/60 (37%)
leucine-rich repeat 688..711 CDD:275380 9/22 (41%)
leucine-rich repeat 712..735 CDD:275380 10/22 (45%)
leucine-rich repeat 740..783 CDD:275380 5/42 (12%)
LRR_8 784..843 CDD:290566 21/61 (34%)
leucine-rich repeat 785..808 CDD:275380 8/25 (32%)
leucine-rich repeat 809..832 CDD:275380 7/22 (32%)
LRR_RI <827..1053 CDD:238064 45/204 (22%)
LRR_8 832..890 CDD:290566 22/89 (25%)
leucine-rich repeat 833..856 CDD:275380 10/22 (45%)
leucine-rich repeat 857..879 CDD:275380 9/27 (33%)
leucine-rich repeat 880..900 CDD:275380 5/49 (10%)
LRR_8 904..963 CDD:290566 10/76 (13%)
leucine-rich repeat 905..928 CDD:275380 5/39 (13%)
leucine-rich repeat 929..952 CDD:275380 2/23 (9%)
leucine-rich repeat 953..977 CDD:275380 6/24 (25%)
leucine-rich repeat 978..1020 CDD:275380
LRR_8 1019..1074 CDD:290566
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
Lrig3NP_796126.4 LRR 1 75..98 10/20 (50%)
LRR_8 76..133 CDD:290566 24/55 (44%)
leucine-rich repeat 76..99 CDD:275378 11/21 (52%)
LRR_RI 81..324 CDD:238064 83/306 (27%)
LRR 2 99..120 6/20 (30%)
leucine-rich repeat 100..146 CDD:275378 17/68 (25%)
LRR_8 122..179 CDD:290566 23/85 (27%)
LRR 3 122..143 10/43 (23%)
LRR 4 146..168 10/27 (37%)
leucine-rich repeat 147..168 CDD:275380 9/22 (41%)
LRR_8 168..227 CDD:290566 16/65 (25%)
leucine-rich repeat 169..192 CDD:275380 4/22 (18%)
LRR 5 169..189 3/19 (16%)
LRR 6 193..214 5/27 (19%)
leucine-rich repeat 194..216 CDD:275380 5/28 (18%)
LRR_8 215..275 CDD:290566 19/85 (22%)
LRR 7 216..237 8/40 (20%)
leucine-rich repeat 217..240 CDD:275380 9/48 (19%)
LRR 8 240..261 5/20 (25%)
leucine-rich repeat 241..264 CDD:275380 6/22 (27%)
LRR_RI 262..>446 CDD:238064 61/208 (29%)
LRR_8 263..323 CDD:290566 20/59 (34%)
LRR 9 264..285 5/20 (25%)
leucine-rich repeat 265..288 CDD:275380 6/22 (27%)
LRR 10 288..309 9/20 (45%)
leucine-rich repeat 289..312 CDD:275380 9/22 (41%)
LRR_8 312..371 CDD:290566 20/83 (24%)
LRR 11 312..333 9/20 (45%)
leucine-rich repeat 313..336 CDD:275380 10/22 (45%)
LRR 12 336..357 4/35 (11%)
leucine-rich repeat 337..360 CDD:275380 5/47 (11%)
LRR_8 359..422 CDD:290566 22/72 (31%)
LRR 13 360..382 5/21 (24%)
leucine-rich repeat 361..385 CDD:275380 7/23 (30%)
LRR 14 387..408 5/20 (25%)
leucine-rich repeat 388..411 CDD:275380 7/22 (32%)
LRR 15 411..432 9/20 (45%)
leucine-rich repeat 412..433 CDD:275380 10/20 (50%)
LRRCT 446..494 CDD:214507 7/47 (15%)
I-set 499..599 CDD:254352 15/99 (15%)
Ig 500..587 CDD:299845 14/86 (16%)
I-set 603..693 CDD:254352 3/7 (43%)
Ig_1 620..694 CDD:143240
I-set 697..784 CDD:254352
IGc2 711..774 CDD:197706
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1019..1093
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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