DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4168 and Lrrc32

DIOPT Version :10

Sequence 1:NP_609740.4 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:XP_006229808.1 Gene:Lrrc32 / 293135 RGDID:1309087 Length:690 Species:Rattus norvegicus


Alignment Length:783 Identity:202/783 - (25%)
Similarity:309/783 - (39%) Gaps:193/783 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   608 FAQMRELSYINLSFNQLKTLPRGLFQSDAHSHL----VEIDLSYNGLERLEAQTFHSLGDLQTLN 668
            :::.|.:||..|....:.||  ||..|.....:    |..:...:||..|:..:..|| |:|.|.
  Rat    22 YSEGRAMSYQILILLAMLTL--GLAISQRRDQVPCRTVNKEALCHGLSLLQVPSVLSL-DIQALY 83

  Fly   669 LQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCS-LSLKSFLY 732
            |..|||::|..........||:||||.|.:..:..|.|..||.|..|:|.||:|.: ::|.|   
  Rat    84 LSGNRLQSILVSPLSFYTALRHLDLSDNEISFLQPGVFQALPYLEHLNLAHNRLAAGMALNS--- 145

  Fly   733 VSNTTTPLRLNVSHNHIASFYDELSSYMYIYQLDISHN--HVTKSDSFTNLANTLRFLNLAHNQL 795
                                 ..|.....:..||:|.|  |.:..:.....|..||.|:||.|.|
  Rat   146 ---------------------GGLGRLPLVVSLDLSGNSLHGSLVERLLGEAPRLRTLSLAENSL 189

  Fly   796 GSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRIL 860
            ..|..|.|..:..:|.|::..|.|..:...:|:.|..|..|:||.|.|  ..:..|| |::|::|
  Rat   190 TRLARHTFWGMPAMEQLDLHSNVLMDIEDGAFEALPQLTHLNLSRNSL--TCISDFS-LQQLQVL 251

  Fly   861 RINSNRLRALPREVFMNT-------RLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMS-HNNL-- 915
            .::.|.:     |.|...       :|.:||:.||:|..:|     |:....|.|.:: .|||  
  Rat   252 DLSCNSI-----ETFQTAPESQAQFQLAWLDLRENKLLHFP-----DLAMFPRLIYLNVSNNLIQ 306

  Fly   916 ----------------EYLDASMFIN----------SQFLYDISLARNRITILPDNTFSFLNNLT 954
                            |...||:..|          ||.| ::.|:.|.|.::|......|.:|.
  Rat   307 LPTGLPQDSEDLHAPSEGWSASLLSNPSRNASIHPLSQLL-NLDLSYNEIELVPAGFLEHLTSLR 370

  Fly   955 NLDLSQNPLVTTNLREVFVHTPRLRKLSLHH-------MGLYVLPPLKLPLLSYLDVSGNYLQEL 1012
            .|:||:|.|.:...|.. ...|.|..|.|.|       :|..||..||..||     ..|.|:||
  Rat   371 FLNLSRNCLRSFEARRA-GSLPCLVLLDLSHNVLEALELGTKVLGSLKTLLL-----QDNTLREL 429

  Fly  1013 SP--LGSLRHLRHVNVSHNKLTNASCAAEHLPPSVRVLDLAHNPLRRITLHDLASLRHLAELNIL 1075
            .|  ...|..|:.:|:..|:::.....||..||.  .:|.:..|    |||         .||:.
  Rat   430 PPYTFAGLASLQRLNLQGNQVSPCGGQAEPGPPG--CVDFSGIP----TLH---------FLNMA 479

  Fly  1076 DVKVTNPQAFSKLRS-LRKLHASSHANLGEIVARIPGLQQLRVHCLEPNIGQQLFAKLANNTKIR 1139
            ...:...:|.|.|.: |.:|..|::..|......:.||:                      ..:.
  Rat   480 GNSMETLRAGSFLHTPLTELDLSANPGLDVATGALVGLE----------------------ASLE 522

  Fly  1140 LLELYGSNVQTIAPDV--FTGLSRSQRLQVKISHTRISDLPPGIFYALREVPHLSIDISHNRINA 1202
            :|||.|:.:..:..|:  |..|.|     :.::..|:|.||........||    :|:.:|..:.
  Rat   523 VLELQGNGLVVLRVDLPCFRRLKR-----LNLAENRLSHLPAWTRAVSLEV----LDLRNNSFSL 578

  Fly  1203 LAADSFYPNKSYWDAVGTRSIMGGLITS-------HNPLECECGLVWFGHWLRRWLRESAQIKVI 1260
            |..::                ||||.||       .|||.| ||..|....|.:     .::.|.
  Rat   579 LPGNA----------------MGGLETSLRRLYLQGNPLSC-CGNGWLAAQLHQ-----GRVDVD 621

  Fly  1261 QKDDLKRMVQRARANTCHDPTSGRHLPILEIFPEDLLCQASALSSSGQRIFLLSFAMALLIPIVM 1325
            ...||          .|.. .|...:.:..:.|||  |:...|.:. ..|.:|||  .|:..||:
  Rat   622 ATQDL----------ICRF-GSQEEVSLSLVRPED--CEKGGLKNV-NLIIILSF--TLVSAIVL 670

  Fly  1326 TTM 1328
            ||:
  Rat   671 TTL 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_609740.4 PRK15370 <69..>353 CDD:185268
leucine-rich repeat 99..118 CDD:275380
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR <338..651 CDD:443914 11/46 (24%)
leucine-rich repeat 339..365 CDD:275380
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380
leucine-rich repeat 414..436 CDD:275380
leucine-rich repeat 437..459 CDD:275380
leucine-rich repeat 460..483 CDD:275380
leucine-rich repeat 484..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
leucine-rich repeat 535..589 CDD:275380
LRR 543..971 CDD:443914 111/405 (27%)
leucine-rich repeat 590..613 CDD:275380 0/4 (0%)
leucine-rich repeat 614..639 CDD:275380 8/24 (33%)
leucine-rich repeat 640..663 CDD:275380 6/26 (23%)
leucine-rich repeat 664..687 CDD:275380 7/22 (32%)
leucine-rich repeat 688..711 CDD:275380 10/22 (45%)
leucine-rich repeat 712..735 CDD:275380 8/23 (35%)
leucine-rich repeat 740..783 CDD:275380 6/44 (14%)
leucine-rich repeat 785..808 CDD:275380 10/22 (45%)
leucine-rich repeat 809..832 CDD:275380 6/22 (27%)
leucine-rich repeat 833..856 CDD:275380 9/22 (41%)
leucine-rich repeat 857..879 CDD:275380 5/28 (18%)
leucine-rich repeat 880..900 CDD:275380 7/19 (37%)
leucine-rich repeat 905..928 CDD:275380 10/51 (20%)
LRR 911..>1203 CDD:443914 79/332 (24%)
leucine-rich repeat 929..952 CDD:275380 6/22 (27%)
leucine-rich repeat 953..977 CDD:275380 7/23 (30%)
leucine-rich repeat 978..1020 CDD:275380 17/50 (34%)
leucine-rich repeat 1045..1068 CDD:275380 5/22 (23%)
leucine-rich repeat 1069..1090 CDD:275380 5/20 (25%)
leucine-rich repeat 1091..1114 CDD:275380 6/22 (27%)
leucine-rich repeat 1115..1161 CDD:275380 7/47 (15%)
leucine-rich repeat 1162..1190 CDD:275380 6/27 (22%)
PCC 1230..>1298 CDD:188093 17/74 (23%)
Lrrc32XP_006229808.1 PPP1R42 82..305 CDD:455733 74/259 (29%)
leucine-rich repeat 82..102 CDD:275380 6/19 (32%)
leucine-rich repeat 103..126 CDD:275380 10/22 (45%)
leucine-rich repeat 127..153 CDD:275380 9/49 (18%)
LRR 153..575 CDD:443914 124/487 (25%)
leucine-rich repeat 154..178 CDD:275380 6/23 (26%)
leucine-rich repeat 179..202 CDD:275380 10/22 (45%)
leucine-rich repeat 203..226 CDD:275380 6/22 (27%)
leucine-rich repeat 227..247 CDD:275380 9/22 (41%)
leucine-rich repeat 248..272 CDD:275380 5/28 (18%)
leucine-rich repeat 273..294 CDD:275380 8/25 (32%)
leucine-rich repeat 345..368 CDD:275380 6/23 (26%)
leucine-rich repeat 393..415 CDD:275380 7/21 (33%)
leucine-rich repeat 416..439 CDD:275380 10/27 (37%)
leucine-rich repeat 440..472 CDD:275380 9/37 (24%)
leucine-rich repeat 473..494 CDD:275380 7/29 (24%)
leucine-rich repeat 496..520 CDD:275380 6/45 (13%)
leucine-rich repeat 521..543 CDD:275380 6/21 (29%)
leucine-rich repeat 544..565 CDD:275380 6/25 (24%)
leucine-rich repeat 566..587 CDD:275380 7/40 (18%)
Blue background indicates that the domain is not in the aligned region.

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