DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4168 and Lrig2

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_001020238.1 Gene:Lrig2 / 269473 MGIID:2443718 Length:1054 Species:Mus musculus


Alignment Length:630 Identity:161/630 - (25%)
Similarity:253/630 - (40%) Gaps:181/630 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 IAHLVLAFNAISRVHPSAFEGLTET-----LEYLDLERNRLTT---------VPVALSSLHHLKY 439
            :|.|::...|: |:.|:|..||...     |..||..|.:|..         :|..:|||.    
Mouse    21 LARLLILAQAL-RLLPAARAGLCPAPCACRLPLLDCSRRKLPAPSWRALSGPLPSDISSLD---- 80

  Fly   440 LYLTSNQISQLNNLPSFTENLRVLSLSGNNFSMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAV 504
              |:.|::|..||.                        |::.| |..:.|.||.:|:||      
Mouse    81 --LSHNRLSNWNNT------------------------LESQT-LQEVKMNYNELTEIP------ 112

  Fly   505 DSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAV 569
                                :.|     |....|:|    :::.|.|:.|       |...:|.:
Mouse   113 --------------------YFG-----EPTPNITL----LSLVHNLIPE-------INAEAFEL 141

  Fly   570 FPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQS 634
            :.|  |||||               |.:|.:.::...||.:| .|.|:|||.|::.||..|.|.:
Mouse   142 YSA--LESLD---------------LSSNIISEIKTSSFPRM-SLKYLNLSNNRISTLEAGCFDN 188

  Fly   635 DAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLV 699
            .:.|.|| :.|:.|.:..:..:.| .|..||.|.|:.||::.:....|..|:.||.|.:..|.:.
Mouse   189 LSDSLLV-VKLNRNRISMIPPKVF-KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGIS 251

  Fly   700 NISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMYIYQ 764
            .:..|||..|.|:..|:|.||.|..:: |.:||      .||:                   :.|
Mouse   252 KLKDGAFFGLNNMEELELEHNNLTGVN-KGWLY------GLRM-------------------LQQ 290

  Fly   765 LDISHNHVTK-SDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQ 828
            |.:|.|.:.| |.........|..|:|::|||..|...||..|..||.||:..|.:|.:....|:
Mouse   291 LYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFR 355

  Fly   829 GLNSLQELDLSHNQLD---QLQVEQFSNLRKLRILRINSNRLRALPREVFMNTR-LEFLDIAENQ 889
            .|::||.|||.:|.:.   :...|.||.|:.|..|.:..||::::.::.|:... ||:||:..| 
Mouse   356 FLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNN- 419

  Fly   890 LSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTFSFLNNLT 954
                          .:.|||.:..:..:|...:...|..|.|..| :..:..|.||.|....|::
Mouse   420 --------------AIMSIQENAFSQTHLKGLVLNTSSLLCDCHL-KWLLQWLVDNNFHHSVNVS 469

  Fly   955 -------------NLDLSQ-------------NPLVTTNLREVFV 973
                         |:||..             :|..|..||.|.|
Mouse   470 CAHPEWLAGQSILNVDLKDFVCDDFLKPQIRTHPESTIALRGVNV 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566
LRR_RI 122..350 CDD:238064
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
LRR_8 265..322 CDD:290566
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR_RI 315..546 CDD:238064 35/170 (21%)
leucine-rich repeat 339..365 CDD:275380
LRR_8 365..424 CDD:290566 12/39 (31%)
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380 8/22 (36%)
LRR_8 413..470 CDD:290566 14/70 (20%)
leucine-rich repeat 414..436 CDD:275380 9/30 (30%)
leucine-rich repeat 437..459 CDD:275380 5/21 (24%)
leucine-rich repeat 460..483 CDD:275380 1/22 (5%)
LRR_8 482..545 CDD:290566 12/62 (19%)
leucine-rich repeat 484..510 CDD:275380 7/25 (28%)
leucine-rich repeat 511..534 CDD:275380 1/22 (5%)
leucine-rich repeat 535..589 CDD:275380 13/53 (25%)
LRR_RI 588..891 CDD:238064 93/307 (30%)
LRR_8 588..650 CDD:290566 20/61 (33%)
leucine-rich repeat 590..613 CDD:275380 5/22 (23%)
leucine-rich repeat 614..639 CDD:275380 10/24 (42%)
LRR_8 638..698 CDD:290566 19/59 (32%)
leucine-rich repeat 640..663 CDD:275380 6/22 (27%)
leucine-rich repeat 664..687 CDD:275380 8/22 (36%)
LRR_8 688..749 CDD:290566 19/60 (32%)
leucine-rich repeat 688..711 CDD:275380 8/22 (36%)
leucine-rich repeat 712..735 CDD:275380 8/22 (36%)
leucine-rich repeat 740..783 CDD:275380 8/43 (19%)
LRR_8 784..843 CDD:290566 24/58 (41%)
leucine-rich repeat 785..808 CDD:275380 10/22 (45%)
leucine-rich repeat 809..832 CDD:275380 8/22 (36%)
LRR_RI <827..1053 CDD:238064 44/177 (25%)
LRR_8 832..890 CDD:290566 20/61 (33%)
leucine-rich repeat 833..856 CDD:275380 10/25 (40%)
leucine-rich repeat 857..879 CDD:275380 5/21 (24%)
leucine-rich repeat 880..900 CDD:275380 5/19 (26%)
LRR_8 904..963 CDD:290566 16/84 (19%)
leucine-rich repeat 905..928 CDD:275380 5/22 (23%)
leucine-rich repeat 929..952 CDD:275380 7/22 (32%)
leucine-rich repeat 953..977 CDD:275380 9/47 (19%)
leucine-rich repeat 978..1020 CDD:275380
LRR_8 1019..1074 CDD:290566
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
Lrig2NP_001020238.1 LRR_RI <16..204 CDD:238064 66/275 (24%)
leucine-rich repeat 53..75 CDD:275378 5/21 (24%)
LRR 1 75..96 9/50 (18%)
LRR 2 97..118 10/52 (19%)
leucine-rich repeat 98..120 CDD:275380 9/52 (17%)
LRR_8 119..178 CDD:290566 24/87 (28%)
LRR 3 120..141 7/31 (23%)
leucine-rich repeat 121..144 CDD:275380 7/33 (21%)
LRR_RI <136..344 CDD:238064 76/253 (30%)
LRR 4 144..165 10/37 (27%)
leucine-rich repeat 145..167 CDD:275380 10/37 (27%)
LRR_8 167..226 CDD:290566 22/60 (37%)
LRR 5 167..188 10/20 (50%)
leucine-rich repeat 168..192 CDD:275380 10/23 (43%)
LRR 6 192..213 6/22 (27%)
leucine-rich repeat 193..215 CDD:275380 6/23 (26%)
LRR 7 215..236 7/20 (35%)
leucine-rich repeat 216..239 CDD:275380 8/22 (36%)
LRR_8 239..298 CDD:290566 23/84 (27%)
LRR 8 239..260 7/20 (35%)
leucine-rich repeat 240..263 CDD:275380 8/22 (36%)
LRR 9 263..284 9/27 (33%)
leucine-rich repeat 264..287 CDD:275380 9/29 (31%)
LRR 10 287..308 6/39 (15%)
leucine-rich repeat 288..311 CDD:275380 6/22 (27%)
LRR_8 311..370 CDD:290566 24/58 (41%)
LRR 11 311..332 9/20 (45%)
leucine-rich repeat 312..335 CDD:275380 10/22 (45%)
LRR 12 335..356 7/20 (35%)
leucine-rich repeat 336..359 CDD:275380 8/22 (36%)
LRR_8 358..421 CDD:290566 20/77 (26%)
LRR_4 359..401 CDD:289563 14/41 (34%)
LRR 13 359..381 7/21 (33%)
leucine-rich repeat 360..384 CDD:275380 9/23 (39%)
LRR_4 385..426 CDD:289563 12/55 (22%)
LRR 14 386..407 5/20 (25%)
leucine-rich repeat 387..410 CDD:275380 5/22 (23%)
LRR 15 410..431 8/35 (23%)
leucine-rich repeat 411..430 CDD:275380 8/33 (24%)
LRRCT 444..492 CDD:214507 11/48 (23%)
Ig 501..597 CDD:299845 6/14 (43%)
IG_like 503..597 CDD:214653 6/12 (50%)
I-set 601..691 CDD:254352
Ig_1 618..692 CDD:143240
I-set 695..782 CDD:254352
Ig 713..782 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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