DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4168 and Lrig1

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_032403.2 Gene:Lrig1 / 16206 MGIID:107935 Length:1091 Species:Mus musculus


Alignment Length:646 Identity:148/646 - (22%)
Similarity:250/646 - (38%) Gaps:191/646 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 LVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVPVALSSLHHLKYLYLTSNQISQLNNLPSF 456
            |.|::|.:|.:..:|||.|| .|:.:.|..|.||.:|               |...:.:..:..|
Mouse    75 LNLSYNRLSEIDSAAFEDLT-NLQEVYLNSNELTAIP---------------SLGAASIGVVSLF 123

  Fly   457 TENLRVLSLSGNNFSMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKI 521
            .::.::||:.|:.        ||:|..|..|::..|:||:|....|.                  
Mouse   124 LQHNKILSVDGSQ--------LKSYLSLEVLDLSSNNITEIRSSCFP------------------ 162

  Fly   522 THLHLGSFAGLEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAVFPARSLESLDPLDALLP 586
                    .|| :|:|::|:.|.|:|.....|:.:||:|..|.||                    
Mouse   163 --------NGL-RIRELNLASNRISILESGAFDGLSRSLLTLRLS-------------------- 198

  Fly   587 LSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLE 651
                      .|.:.|:..::|                 .|||          |.::||:.|.:.
Mouse   199 ----------KNRITQLPVKAF-----------------KLPR----------LTQLDLNRNRIR 226

  Fly   652 RLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALD 716
            .:|..||..|..|:.|.||.|.:..:...||..|..:..|.|.||.||.::.|:...|..|..|.
Mouse   227 LIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLH 291

  Fly   717 LMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDE-LSSYMYIYQLDISHN---HVTKSDS 777
            |.:|.:..:....:.:.....   .|.:|.|::....:| |:....:..|.:|||   |:.:. :
Mouse   292 LSNNSISRIQRDGWSFCQKLH---ELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEG-A 352

  Fly   778 FTNLANTLRFLNLAHNQL-GSLQ--SHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLS 839
            |..| .:||.|:|.||:: |:::  |.||..|:.|..|.:..|.:.|:.:|:|.||.||:.|:|.
Mouse   353 FKGL-KSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLG 416

  Fly   840 HNQLDQLQVEQFSNLRKLRILRINSN------RLRALP------------------------REV 874
            .|.:..:|.:.|:.::.|:.|.|:|.      :|:.||                        :.:
Mouse   417 ENAIRSVQFDAFAKMKNLKELYISSESFLCDCQLKWLPPWLMGRMLQAFVTATCAHPESLKGQSI 481

  Fly   875 FMNTRLEFL--DIAENQLSVWPVPAFT----DIGFTLRSIQMSHNNLEYLDASMFINSQFLYDIS 933
            |......|:  |..:.|:...|.....    ||.||..:...|.:.:                  
Mouse   482 FSVLPDSFVCDDFPKPQIITQPETTMAVVGKDIRFTCSAASSSSSPM------------------ 528

  Fly   934 LARNRITILPDNTFSFLNN---LTNLDLSQNPLVTTNLREVFVHTP--RLRKLSLHHMGLY 989
                        ||::..:   |.|.|:.....|.....||..:|.  .||.::..|.|.|
Mouse   529 ------------TFAWKKDNEVLANADMENFAHVRAQDGEVMEYTTILHLRHVTFGHEGRY 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566
LRR_RI 122..350 CDD:238064
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
LRR_8 265..322 CDD:290566
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR_RI 315..546 CDD:238064 36/153 (24%)
leucine-rich repeat 339..365 CDD:275380
LRR_8 365..424 CDD:290566 12/31 (39%)
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380 8/19 (42%)
LRR_8 413..470 CDD:290566 11/56 (20%)
leucine-rich repeat 414..436 CDD:275380 6/21 (29%)
leucine-rich repeat 437..459 CDD:275380 2/21 (10%)
leucine-rich repeat 460..483 CDD:275380 6/22 (27%)
LRR_8 482..545 CDD:290566 13/62 (21%)
leucine-rich repeat 484..510 CDD:275380 7/25 (28%)
leucine-rich repeat 511..534 CDD:275380 2/22 (9%)
leucine-rich repeat 535..589 CDD:275380 13/53 (25%)
LRR_RI 588..891 CDD:238064 83/341 (24%)
LRR_8 588..650 CDD:290566 10/61 (16%)
leucine-rich repeat 590..613 CDD:275380 3/22 (14%)
leucine-rich repeat 614..639 CDD:275380 3/24 (13%)
LRR_8 638..698 CDD:290566 20/59 (34%)
leucine-rich repeat 640..663 CDD:275380 8/22 (36%)
leucine-rich repeat 664..687 CDD:275380 8/22 (36%)
LRR_8 688..749 CDD:290566 15/60 (25%)
leucine-rich repeat 688..711 CDD:275380 8/22 (36%)
leucine-rich repeat 712..735 CDD:275380 4/22 (18%)
leucine-rich repeat 740..783 CDD:275380 12/46 (26%)
LRR_8 784..843 CDD:290566 24/61 (39%)
leucine-rich repeat 785..808 CDD:275380 11/25 (44%)
leucine-rich repeat 809..832 CDD:275380 8/22 (36%)
LRR_RI <827..1053 CDD:238064 41/204 (20%)
LRR_8 832..890 CDD:290566 17/89 (19%)
leucine-rich repeat 833..856 CDD:275380 6/22 (27%)
leucine-rich repeat 857..879 CDD:275380 8/51 (16%)
leucine-rich repeat 880..900 CDD:275380 4/25 (16%)
LRR_8 904..963 CDD:290566 7/61 (11%)
leucine-rich repeat 905..928 CDD:275380 1/22 (5%)
leucine-rich repeat 929..952 CDD:275380 2/22 (9%)
leucine-rich repeat 953..977 CDD:275380 7/25 (28%)
leucine-rich repeat 978..1020 CDD:275380 5/12 (42%)
LRR_8 1019..1074 CDD:290566
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
Lrig1NP_032403.2 leucine-rich repeat 53..71 CDD:275380
LRR_RI 57..325 CDD:238064 82/360 (23%)
LRR 1 71..92 6/16 (38%)
leucine-rich repeat 72..95 CDD:275380 9/20 (45%)
LRR_8 73..129 CDD:290566 17/69 (25%)
LRR 2 95..116 7/35 (20%)
LRR 3 118..139 5/28 (18%)
LRR_8 142..225 CDD:290566 32/166 (19%)
LRR 4 142..163 7/46 (15%)
leucine-rich repeat 143..166 CDD:275380 9/49 (18%)
LRR 5 166..187 7/20 (35%)
leucine-rich repeat 167..190 CDD:275380 7/22 (32%)
leucine-rich repeat 191..214 CDD:275380 8/69 (12%)
LRR 6 191..212 7/67 (10%)
LRR_8 213..273 CDD:290566 22/69 (32%)
LRR 7 214..235 8/30 (27%)
leucine-rich repeat 215..238 CDD:275380 8/22 (36%)
LRR_RI 238..>423 CDD:238064 56/189 (30%)
LRR 8 238..259 7/20 (35%)
leucine-rich repeat 239..262 CDD:275380 8/22 (36%)
LRR_8 261..321 CDD:290566 15/62 (24%)
LRR 9 262..283 7/20 (35%)
leucine-rich repeat 263..286 CDD:275380 8/22 (36%)
LRR 10 286..307 4/20 (20%)
leucine-rich repeat 287..310 CDD:275380 4/22 (18%)
LRR_8 310..369 CDD:290566 18/63 (29%)
LRR 11 310..331 5/23 (22%)
leucine-rich repeat 311..334 CDD:275380 5/25 (20%)
LRR 12 334..355 6/21 (29%)
leucine-rich repeat 335..358 CDD:275380 7/24 (29%)
LRR 13 358..380 8/21 (38%)
leucine-rich repeat 359..383 CDD:275380 10/23 (43%)
LRR_8 385..441 CDD:290566 18/55 (33%)
LRR 14 385..406 6/20 (30%)
leucine-rich repeat 386..409 CDD:275380 8/22 (36%)
LRR 15 409..430 7/20 (35%)
leucine-rich repeat 410..433 CDD:275380 6/22 (27%)
LRRCT 444..492 CDD:214507 5/47 (11%)
Ig_3 496..583 CDD:290638 21/112 (19%)
I-set 497..597 CDD:254352 21/111 (19%)
I-set 601..691 CDD:254352
Ig_1 618..692 CDD:143240
I-set 695..782 CDD:254352
IGc2 709..772 CDD:197706
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 912..990
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1059..1091
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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