DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4168 and lrig3

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:XP_002940426.3 Gene:lrig3 / 100151727 XenbaseID:XB-GENE-1219309 Length:1109 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566
LRR_RI 122..350 CDD:238064
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
LRR_8 265..322 CDD:290566
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR_RI 315..546 CDD:238064
leucine-rich repeat 339..365 CDD:275380
LRR_8 365..424 CDD:290566
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380
LRR_8 413..470 CDD:290566
leucine-rich repeat 414..436 CDD:275380
leucine-rich repeat 437..459 CDD:275380
leucine-rich repeat 460..483 CDD:275380
LRR_8 482..545 CDD:290566
leucine-rich repeat 484..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
leucine-rich repeat 535..589 CDD:275380
LRR_RI 588..891 CDD:238064
LRR_8 588..650 CDD:290566
leucine-rich repeat 590..613 CDD:275380
leucine-rich repeat 614..639 CDD:275380
LRR_8 638..698 CDD:290566
leucine-rich repeat 640..663 CDD:275380
leucine-rich repeat 664..687 CDD:275380
LRR_8 688..749 CDD:290566
leucine-rich repeat 688..711 CDD:275380
leucine-rich repeat 712..735 CDD:275380
leucine-rich repeat 740..783 CDD:275380
LRR_8 784..843 CDD:290566
leucine-rich repeat 785..808 CDD:275380
leucine-rich repeat 809..832 CDD:275380
LRR_RI <827..1053 CDD:238064
LRR_8 832..890 CDD:290566
leucine-rich repeat 833..856 CDD:275380
leucine-rich repeat 857..879 CDD:275380
leucine-rich repeat 880..900 CDD:275380
LRR_8 904..963 CDD:290566
leucine-rich repeat 905..928 CDD:275380
leucine-rich repeat 929..952 CDD:275380
leucine-rich repeat 953..977 CDD:275380
leucine-rich repeat 978..1020 CDD:275380
LRR_8 1019..1074 CDD:290566
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
lrig3XP_002940426.3 LRRNT 40..67 CDD:214470
leucine-rich repeat 52..69 CDD:275380
LRR <58..>243 CDD:227223
internalin_A 70..>437 CDD:380193
leucine-rich repeat 73..93 CDD:275380
leucine-rich repeat 94..140 CDD:275380
leucine-rich repeat 141..163 CDD:275380
leucine-rich repeat 164..187 CDD:275380
leucine-rich repeat 189..211 CDD:275380
leucine-rich repeat 212..235 CDD:275380
leucine-rich repeat 236..259 CDD:275380
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..331 CDD:275380
leucine-rich repeat 332..355 CDD:275380
leucine-rich repeat 356..380 CDD:275380
leucine-rich repeat 383..406 CDD:275380
leucine-rich repeat 407..428 CDD:275380
PCC 411..>489 CDD:188093
Ig_3 493..580 CDD:404760
Ig strand A 494..497 CDD:409353
Ig strand A' 500..505 CDD:409353
Ig strand B 511..519 CDD:409353
Ig strand C 526..531 CDD:409353
Ig strand C' 533..535 CDD:409353
Ig strand D 552..555 CDD:409353
Ig strand E 559..565 CDD:409353
Ig strand F 572..579 CDD:409353
Ig strand G 586..594 CDD:409353
IgI_LRIG1-like 600..689 CDD:409420
Ig strand B 615..619 CDD:409420
Ig strand C 628..632 CDD:409420
Ig strand E 654..658 CDD:409420
Ig strand F 668..673 CDD:409420
Ig strand G 681..684 CDD:409420
I-set 692..779 CDD:400151
Ig strand A 693..695 CDD:409353
Ig strand A' 700..704 CDD:409353
Ig strand B 707..714 CDD:409353
Ig strand C 721..727 CDD:409353
Ig strand C' 728..730 CDD:409353
Ig strand D 737..740 CDD:409353
Ig strand E 743..751 CDD:409353
Ig strand F 758..766 CDD:409353
Ig strand G 770..779 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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