DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4168 and lrrc32

DIOPT Version :9

Sequence 1:NP_001285953.1 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:XP_001920576.2 Gene:lrrc32 / 100148867 ZFINID:ZDB-GENE-090630-1 Length:659 Species:Danio rerio


Alignment Length:690 Identity:186/690 - (26%)
Similarity:280/690 - (40%) Gaps:152/690 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 VQWKELQVR----PLRMHLERLDLGQNCIENLESDYFQQNYSDVHLRALNLEQNFVTQLPEAVFK 385
            |....|.:|    ||...:..|||.||.::||.   .|...|...||.|:|..            
Zfish    34 VDCSSLSLRRVPAPLPSSIRLLDLSQNLLQNLT---LQDLPSRSSLRRLDLHH------------ 83

  Fly   386 ATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVPVALSSLHHLKYLYLTSNQISQL 450
                       |.|..:.|..|..|.. ||.|||..|.|.    ..::||            :.|
Zfish    84 -----------NQIQFLQPGLFRDLLH-LEDLDLSGNALD----LYAALH------------TPL 120

  Fly   451 NNLPSFTENLRVLSLSGNN-FSMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSN-LQT 513
            ..||:    ||.|.||||. |:.:....|.:...|:.|::..||||.|....|.    ||. ||.
Zfish   121 GPLPA----LRRLDLSGNGLFTDMSDYFLSDAPALTNLSLDGNSITKISRTTFN----GSQALQN 177

  Fly   514 ILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIHHPLVFENVS-RTLKILELSFAVFPARSLE- 576
            |.|.||.|..:..|:|..|.::.|:.||.|.|:....  |..|. |||.:...|...|.:..:| 
Zfish   178 IDLHNNVIIEIEEGAFEFLTELSELDLSVNSISCITD--FNLVQLRTLNLSRNSLTNFQSLDMED 240

  Fly   577 --SLDPLD---------ALLP-LSQLIWLGLDNNNLKQVS----NESFAQMRELSYINLSFNQLK 625
              .|..||         .:|| .::|::|.|..|.|:.|:    .|....:||..|:..:.::..
Zfish   241 EFQLQHLDLRENKLLYFPVLPQRNRLMYLDLSRNLLRSVNCSGPLEELESLRESGYLLTAHDKPL 305

  Fly   626 TLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRY 690
            ||.....|.:. ..|:.:|||:|.|:.|.:..|.|:..|::||:.:|.|::.   :..:|..|:.
Zfish   306 TLCANERQQEL-GRLLYLDLSFNQLKTLSSSFFSSMAALESLNISNNCLQSF---SVDSLRSLKT 366

  Fly   691 LDLSYNRLVNISH--GAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFY 753
            ||||:|.|.|:|.  ||   ||.|..|.|..|.|..|....|   |:..:...|::..|.::...
Zfish   367 LDLSFNNLQNLSFSGGA---LPALEVLLLQGNALHLLDAHIF---SSLPSIRSLHLQQNLLSICA 425

  Fly   754 DELSSYMYIYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNN 818
            |...|...::..||.               :|.:|.|:.|.|.|:...||.....| ||:::.|.
Zfish   426 DPQISSGCVHLSDIP---------------SLTYLYLSENSLSSIPDGAFKGSPLL-ILDLSLNP 474

  Fly   819 LTSLRRRSFQGL-NSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNTRLEF 882
            ...:...|..|: .||..|.|..|||..|.:: |...:|||.|.::.|||               
Zfish   475 GVDITAASLSGVETSLTHLSLRGNQLHSLSID-FRVFQKLRSLDVSVNRL--------------- 523

  Fly   883 LDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTF 947
                 :.:|.|...:..:|      :.:.:|.:|.|.:::.          ..|.|...:..|..
Zfish   524 -----SGVSPWSEDSSVEI------LNLQNNRVEALGSALL----------QGRLRTLYVGWNPL 567

  Fly   948 SFLNNLTNLDLSQNPLVTTNLREVFVHTPRLRKLSLHHMG 987
            |...|...|||         |::..:|.|.|...:..:.|
Zfish   568 SCCRNPQLLDL---------LQQERLHVPDLAAATCWYSG 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_001285953.1 leucine-rich repeat 99..118 CDD:275380
LRR_8 121..181 CDD:290566
LRR_RI 122..350 CDD:238064 10/28 (36%)
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
LRR_8 265..322 CDD:290566
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380 5/16 (31%)
LRR_RI 315..546 CDD:238064 68/226 (30%)
leucine-rich repeat 339..365 CDD:275380 9/25 (36%)
LRR_8 365..424 CDD:290566 15/58 (26%)
leucine-rich repeat 366..388 CDD:275380 4/21 (19%)
leucine-rich repeat 389..412 CDD:275380 5/22 (23%)
LRR_8 413..470 CDD:290566 19/57 (33%)
leucine-rich repeat 414..436 CDD:275380 8/21 (38%)
leucine-rich repeat 437..459 CDD:275380 3/21 (14%)
leucine-rich repeat 460..483 CDD:275380 9/23 (39%)
LRR_8 482..545 CDD:290566 24/63 (38%)
leucine-rich repeat 484..510 CDD:275380 9/25 (36%)
leucine-rich repeat 511..534 CDD:275380 10/22 (45%)
leucine-rich repeat 535..589 CDD:275380 18/67 (27%)
LRR_RI 588..891 CDD:238064 85/309 (28%)
LRR_8 588..650 CDD:290566 18/65 (28%)
leucine-rich repeat 590..613 CDD:275380 7/26 (27%)
leucine-rich repeat 614..639 CDD:275380 4/24 (17%)
LRR_8 638..698 CDD:290566 21/59 (36%)
leucine-rich repeat 640..663 CDD:275380 9/22 (41%)
leucine-rich repeat 664..687 CDD:275380 6/22 (27%)
LRR_8 688..749 CDD:290566 23/62 (37%)
leucine-rich repeat 688..711 CDD:275380 12/24 (50%)
leucine-rich repeat 712..735 CDD:275380 7/22 (32%)
leucine-rich repeat 740..783 CDD:275380 6/42 (14%)
LRR_8 784..843 CDD:290566 19/59 (32%)
leucine-rich repeat 785..808 CDD:275380 8/22 (36%)
leucine-rich repeat 809..832 CDD:275380 6/23 (26%)
LRR_RI <827..1053 CDD:238064 36/162 (22%)
LRR_8 832..890 CDD:290566 16/57 (28%)
leucine-rich repeat 833..856 CDD:275380 8/22 (36%)
leucine-rich repeat 857..879 CDD:275380 6/21 (29%)
leucine-rich repeat 880..900 CDD:275380 2/19 (11%)
LRR_8 904..963 CDD:290566 11/58 (19%)
leucine-rich repeat 905..928 CDD:275380 3/22 (14%)
leucine-rich repeat 929..952 CDD:275380 4/22 (18%)
leucine-rich repeat 953..977 CDD:275380 5/23 (22%)
leucine-rich repeat 978..1020 CDD:275380 2/10 (20%)
LRR_8 1019..1074 CDD:290566
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
lrrc32XP_001920576.2 LRR_RI 33..276 CDD:238064 86/294 (29%)
leucine-rich repeat 55..75 CDD:275380 9/22 (41%)
leucine-rich repeat 76..125 CDD:275380 20/88 (23%)
leucine-rich repeat 100..122 CDD:275380 10/37 (27%)
leucine-rich repeat 126..150 CDD:275380 9/23 (39%)
LRR_8 149..209 CDD:290566 24/63 (38%)
leucine-rich repeat 151..174 CDD:275380 10/26 (38%)
leucine-rich repeat 175..198 CDD:275380 10/22 (45%)
LRR_RI 198..453 CDD:238064 77/281 (27%)
leucine-rich repeat 199..219 CDD:275380 6/21 (29%)
leucine-rich repeat 220..243 CDD:275380 6/22 (27%)
leucine-rich repeat 266..318 CDD:275380 13/52 (25%)
leucine-rich repeat 288..310 CDD:275380 5/21 (24%)
LRR_8 318..374 CDD:290566 21/58 (36%)
leucine-rich repeat 319..342 CDD:275380 9/22 (41%)
leucine-rich repeat 343..363 CDD:275380 6/22 (27%)
LRR_8 362..421 CDD:290566 23/64 (36%)
leucine-rich repeat 387..410 CDD:275380 8/25 (32%)
leucine-rich repeat 411..441 CDD:275380 6/44 (14%)
leucine-rich repeat 442..463 CDD:275380 8/20 (40%)
leucine-rich repeat 465..489 CDD:275380 6/24 (25%)
leucine-rich repeat 490..512 CDD:275380 8/22 (36%)
leucine-rich repeat 513..534 CDD:275380 8/40 (20%)
leucine-rich repeat 535..555 CDD:275380 4/35 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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