DRSC/TRiP Functional Genomics Resources

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Protein Alignment stc and NFX1

DIOPT Version :10

Sequence 1:NP_476599.1 Gene:stc / 34888 FlyBaseID:FBgn0001978 Length:1106 Species:Drosophila melanogaster
Sequence 2:NP_001305687.1 Gene:NFX1 / 4799 HGNCID:7803 Length:1121 Species:Homo sapiens


Alignment Length:1041 Identity:393/1041 - (37%)
Similarity:543/1041 - (52%) Gaps:109/1041 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 SVNPSNSNFSSFYTPFGNNPFDFSA----------SKLQASAPEFVPNFAKLSLEETPAAATTNG 196
            |.:||.|...|..|.|.::|.:.|.          .||:..........|:...|:|        
Human    72 SYHPSGSKPKSQQTSFQSSPCNKSPKSHGLQNQPWQKLRNEKHHIRVKKAQSLAEQT-------- 128

  Fly   197 NSTASLETAINETRPRTLRAQEPAE----------RGANNQCSN---HNYERERERERDRDRDRE 248
            :.||.||::........||...|:|          |||..:.:.   ::|.| ..:.:.:.:...
Human   129 SDTAGLESSTRSESGTDLREHSPSESEKEVVGADPRGAKPKKATQFVYSYGR-GPKVKGKLKCEW 192

  Fly   249 RDRDRDRDRDRDRDRDR-----DRDSRPGNTRQQRRSDY--RDDREDRYERS------------D 294
            .:|...:..|...:..:     ..||...::|:.....|  |.:.:.||.:.            .
Human   193 SNRTTPKPEDAGPESTKPVGVFHPDSSEASSRKGVLDGYGARRNEQRRYPQKRPPWEVEGARPRP 257

  Fly   295 RRRPQKQQ--RYDN--HRSNK---RRDDWN----------RNRDRINGFPRAVDDLDTSNESAHP 342
            .|.|.||:  |:.|  ||:|.   .:||.|          .|...||...|.||....:.....|
Human   258 GRNPPKQEGHRHTNAGHRNNMGPIPKDDLNERPAKSTCDSENLAVINKSSRRVDQEKCTVRRQDP 322

  Fly   343 SPEKQSQLQQISP-RRGPPLPPADNEKLSQRE----KLVRDIEQRRLECLVCVEAIKSHQPTWSC 402
                    |.:|| .||     ..|..|...|    .|:..:...:.||:||.|.::...|.|||
Human   323 --------QVVSPFSRG-----KQNHVLKNVETHTGSLIEQLTTEKYECMVCCELVRVTAPVWSC 374

  Fly   403 RNCYHMLHLKCTITWASSSKSEV----GWRCPACQNVLQDLPRDYLCFCGKLKNPPVSRTELAHS 463
            ::|||:.||.|...||.|..|:.    ||||||||||...:|..|.|||||:|||..||.|:.||
Human   375 QSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNTYTCFCGKVKNPEWSRNEIPHS 439

  Fly   464 CGEVCCRI---EGCSHACTLLCHPGPCPPCQANVVRSCGCGRSTKTMQCAMKEEVLCGEICDKLL 525
            |||||.:.   :.|.|:|.|||||||||||.|.:.::|.|||:..|::|.....|.|...|:.:|
Human   440 CGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENIL 504

  Fly   526 NCGEHRCQAECHSGKCAACSEQVVQQCHCGKQERKVPC---TRESQDKRTYSCKDSCGQPLPCGH 587
            |||:|:|...||.|:|..|...:.|.|:||...|.|.|   ..:|.....:||...||:.|.||:
Human   505 NCGQHQCAELCHGGQCQPCQIILNQVCYCGSTSRDVLCGTDVGKSDGFGDFSCLKICGKDLKCGN 569

  Fly   588 HKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVP------AGQRSSCLDPIPTCEGICSRTLRCGK 646
            |.|...||...|:.|...|:.:..||||:.|:.      :..|.:|:||:|:|..:|.:.|.||.
Human   570 HTCSQVCHPQPCQQCPRLPQLVRCCPCGQTPLSQLLELGSSSRKTCMDPVPSCGKVCGKPLPCGS 634

  Fly   647 PAHPHQCGSKCHLGQCPPCPKQTGVKCRCGHMDQMIKCRQLCNRADDA-RCKRRCTKKRSCGKHK 710
            ....|.|...||.|.|.||.:.:.:.|||....:.:.|..|.:.||.. .|.:||.|||.||:||
Human   635 LDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKELPCTSLKSEADATFMCDKRCNKKRLCGRHK 699

  Fly   711 CNVECCIDIDHDCPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGT 775
            ||..||:|.:|.|||.|.|.|.||.|:|::|||||||..|:::||:||.|.|||.||||||||||
Human   700 CNEICCVDKEHKCPLICGRKLRCGLHRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGT 764

  Fly   776 KKPICKLPCSRIHPCDHPPQHNCHSGPTCPPCMIFTTKLCHGNHELRKTIPCSQPNFSCGMACGK 840
            :.|.|...|:|:|.||||..|:|||...||||...|.|.|.|.||.|..|||...:.|||:.|..
Human   765 RPPECTQTCARVHECDHPVYHSCHSEEKCPPCTFLTQKWCMGKHEFRSNIPCHLVDISCGLPCSA 829

  Fly   841 PLPCGGHKCIKPCHEGPCQSAGEICRQSCTKPRPTCGHKCAAACHEGA-CPETPCKELVEVQCEC 904
            .||||.|||.:.||:|.| ...|.|:|.||.||..|||.|.|.||..: ||.|.||..||:||||
Human   830 TLPCGMHKCQRLCHKGEC-LVDEPCKQPCTTPRADCGHPCMAPCHTSSPCPVTACKAKVELQCEC 893

  Fly   905 GNRKQNRSCQELAREHSRIATIQLASSMAEMSRGNYMELSEILAPAKKSNKTLDCNDECRLLERN 969
            |.||:...|.|.:..:.|||.|.:||.:.:|..|..:|:|:::...:.....|:|::||..|||.
Human   894 GRRKEMVICSEASSTYQRIAAISMASKITDMQLGGSVEISKLITKKEVHQARLECDEECSALERK 958

  Fly   970 RRLAAALS-SGNSD--TKQKCLTKYSEFVRGFAKKNPALTKSVYETLTDLVKLAKESKQRSRSHS 1031
            :|||.|.. |.:||  ..:...:|:|:.::..|:|:......|.:.:..||:...:.|...:|||
Human   959 KRLAEAFHISEDSDPFNIRSSGSKFSDSLKEDARKDLKFVSDVEKEMETLVEAVNKGKNSKKSHS 1023

  Fly  1032 FPTMNREKRQLVHELCEVFGIESVSYDKEPNRNVVATAHKDRCWFPATSIMEVLARESGQRRVPV 1096
            ||.|||:.|:::|:|.:|:|:||||||.||.||||.||.:.:...|.|::..||.||. |.|.|.
Human  1024 FPPMNRDHRRIIHDLAQVYGLESVSYDSEPKRNVVVTAIRGKSVCPPTTLTGVLEREM-QARPPP 1087

  Fly  1097 P 1097
            |
Human  1088 P 1088

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stcNP_476599.1 RING_Ubox 385..433 CDD:473075 25/51 (49%)
NF-X1-zinc-finger 464..510 CDD:100116 25/48 (52%)
NF-X1-zinc-finger 517..565 CDD:100116 20/50 (40%)
NF-X1-zinc-finger 575..617 CDD:100116 17/41 (41%)
NF-X1-zinc-finger 634..686 CDD:100116 17/51 (33%)
NF-X1-zinc-finger 723..775 CDD:100116 34/51 (67%)
NF-X1-zinc-finger 834..882 CDD:100116 25/47 (53%)
NF-X1-zinc-finger 865..915 CDD:100116 28/50 (56%)
R3H_NF-X1 996..1069 CDD:100072 31/72 (43%)
NFX1NP_001305687.1 Interaction with PABPC1 and PABC4. /evidence=ECO:0000269|PubMed:17267499 9..26
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..295 48/231 (21%)
RING-CH-C4HC3_NFX1 356..409 CDD:438357 25/52 (48%)
NF-X1-zinc-finger 496..544 CDD:100116 20/47 (43%)
NF-X1-zinc-finger 557..599 CDD:100116 17/41 (41%)
NF-X1-zinc-finger 622..674 CDD:100116 17/51 (33%)
NF-X1-zinc-finger 685..733 CDD:100116 28/47 (60%)
NF-X1-zinc-finger 712..764 CDD:100116 34/51 (67%)
NF-X1-zinc-finger 823..868 CDD:100116 24/45 (53%)
R3H_NF-X1 988..1061 CDD:100072 31/72 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1082..1110 4/7 (57%)
Blue background indicates that the domain is not in the aligned region.

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