DRSC/TRiP Functional Genomics Resources

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Protein Alignment stc and nfxl1

DIOPT Version :9

Sequence 1:NP_476599.1 Gene:stc / 34888 FlyBaseID:FBgn0001978 Length:1106 Species:Drosophila melanogaster
Sequence 2:XP_012823254.2 Gene:nfxl1 / 100126060 XenbaseID:XB-GENE-964724 Length:913 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stcNP_476599.1 NF-X1-zinc-finger 464..510 CDD:100116
NF-X1-zinc-finger 517..565 CDD:100116
NF-X1-zinc-finger 575..617 CDD:100116
NF-X1-zinc-finger 634..686 CDD:100116
NF-X1-zinc-finger 723..775 CDD:100116
NF-X1-zinc-finger 834..882 CDD:100116
NF-X1-zinc-finger 865..915 CDD:100116
R3H_NF-X1 996..1069 CDD:100072
nfxl1XP_012823254.2 RING-CH-C4HC3_NFXL1 160..223 CDD:319611
NF-X1-zinc-finger 311..359 CDD:100116
NF-X1-zinc-finger 364..412 CDD:100116
NF-X1-zinc-finger 417..465 CDD:100116
NF-X1-zinc-finger 496..544 CDD:100116
NF-X1-zinc-finger 702..751 CDD:100116
NF-X1-zinc-finger 766..812 CDD:100116
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D299100at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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