DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15269 and ZNF28

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_008900.3 Gene:ZNF28 / 7576 HGNCID:13073 Length:718 Species:Homo sapiens


Alignment Length:222 Identity:95/222 - (42%)
Similarity:128/222 - (57%) Gaps:5/222 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 EISYKCRICEKVFGCSETLQAHEKTHKSPR-YECADCGKGFSQLRNYKYHLSVHRGTKEFAAECP 358
            |..|||::|:|.|.....|..|::.|...: |.|.:|||.||...|...|..:|...|.:  :|.
Human   492 EKPYKCKVCDKAFRSDSCLTEHQRVHTGEKPYMCNECGKVFSTKANLACHHKLHTAEKPY--KCE 554

  Fly   359 ECGKTFNDKGYLSSHLKIHRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCNECGKRFSRK 423
            ||.|.|:.|.::..|.:||...|.|:|..|.|:|.:......|.|:|||.||:|||||||.|.:.
Human   555 ECEKVFSRKSHMERHRRIHTGEKPYKCKVCDKAFRRDSHLAQHQRVHTGEKPYKCNECGKTFRQT 619

  Fly   424 MLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNY 488
            ..|..|.|.|:|||||:|:.|||:|:..|::..|||||||.||:.|..|.|.|.::.||..|...
Human   620 SSLIIHRRLHTGEKPYKCNECGKTFSQMSSLVYHHRLHSGEKPYKCNECGKVFNQQAHLAQHQRV 684

  Fly   489 HTGCKPYVCPHPNCNQAFTQSSNMRTH 515
            |||.|||.|  ..|.:.|:|.||:..|
Human   685 HTGEKPYKC--NECGKTFSQMSNLVYH 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 6/19 (32%)
COG5048 <316..502 CDD:227381 81/186 (44%)
C2H2 Zn finger 327..347 CDD:275368 8/19 (42%)
zf-C2H2 356..377 CDD:278523 7/20 (35%)
C2H2 Zn finger 357..377 CDD:275368 7/19 (37%)
zf-H2C2_2 369..394 CDD:290200 9/24 (38%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
zf-H2C2_2 397..422 CDD:290200 15/24 (63%)
C2H2 Zn finger 413..433 CDD:275368 10/19 (53%)
zf-H2C2_2 426..449 CDD:290200 13/22 (59%)
zf-C2H2 439..461 CDD:278523 10/21 (48%)
C2H2 Zn finger 441..461 CDD:275368 9/19 (47%)
zf-C2H2 467..489 CDD:278523 7/21 (33%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
C2H2 Zn finger 497..515 CDD:275368 6/17 (35%)
ZNF28NP_008900.3 KRAB 8..>48 CDD:214630
KRAB 8..47 CDD:279668
COG5048 <143..373 CDD:227381
C2H2 Zn finger 217..237 CDD:275368
C2H2 Zn finger 245..265 CDD:275368
COG5048 267..655 CDD:227381 67/164 (41%)
C2H2 Zn finger 273..293 CDD:275368
C2H2 Zn finger 301..321 CDD:275368
C2H2 Zn finger 329..349 CDD:275368
zf-H2C2_2 341..366 CDD:290200
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 370..394 CDD:290200
C2H2 Zn finger 385..405 CDD:275368
zf-H2C2_2 397..422 CDD:290200
C2H2 Zn finger 413..433 CDD:275368
zf-H2C2_2 425..450 CDD:290200
C2H2 Zn finger 441..461 CDD:275368
C2H2 Zn finger 469..489 CDD:275368
zf-H2C2_2 481..506 CDD:290200 7/13 (54%)
C2H2 Zn finger 497..517 CDD:275368 6/19 (32%)
zf-H2C2_2 510..534 CDD:290200 9/23 (39%)
C2H2 Zn finger 525..545 CDD:275368 8/19 (42%)
C2H2 Zn finger 553..573 CDD:275368 7/19 (37%)
zf-H2C2_2 565..590 CDD:290200 9/24 (38%)
C2H2 Zn finger 581..601 CDD:275368 6/19 (32%)
zf-H2C2_2 593..618 CDD:290200 15/24 (63%)
C2H2 Zn finger 609..629 CDD:275368 10/19 (53%)
zf-H2C2_2 621..646 CDD:290200 14/24 (58%)
C2H2 Zn finger 637..657 CDD:275368 9/19 (47%)
C2H2 Zn finger 665..685 CDD:275368 7/19 (37%)
zf-H2C2_2 677..702 CDD:290200 12/26 (46%)
C2H2 Zn finger 693..713 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.