DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and PRDM1

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_011534364.1 Gene:PRDM1 / 639 HGNCID:9346 Length:839 Species:Homo sapiens


Alignment Length:522 Identity:133/522 - (25%)
Similarity:186/522 - (35%) Gaps:170/522 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SPSPARTSPTNGVQNLGAGAQLPPAQVTDFSISKILGKERKSAQDTSTNILDLSKSSSNSIRSPQ 73
            ||.|:.|:|:            |.|               :|:.|.|     |..||.:|  || 
Human   341 SPIPSSTTPS------------PSA---------------RSSPDQS-----LKSSSPHS--SP- 370

  Fly    74 ALGGLAIPSTP----------YASGAYSM--------------LPPDLVAMANATKFYAQFFPHL 114
              |....|..|          |.:.:|..              |||..:...||  .|.:|   |
Human   371 --GNTVSPVGPGSQEHRDSYAYLNASYGTEGLGSYPGYAPLPHLPPAFIPSYNA--HYPKF---L 428

  Fly   115 LPAY-------AAAAAAAGLST----PPTSPYQTHQHQQHLPNQQKRFFAPYVINGSVPPPPPLQ 168
            ||.|       :|.::..|::.    |...|                .::..:..||:|      
Human   429 LPPYGMNCNGLSAVSSMNGINNFGLFPRLCP----------------VYSNLLGGGSLP------ 471

  Fly   169 QQQQPLIRTKSTACTRPDCPECLDYYQRLQTGGYKQTAPLISPAASSVSSSTGSIRPVRDLIMSA 233
               .|::...|...:.|.     |..:||....:.:  .::.||..|..|.||:...::|...|.
Human   472 ---HPMLNPTSLPSSLPS-----DGARRLLQPEHPR--EVLVPAPHSAFSFTGAAASMKDKACSP 526

  Fly   234 TGGAASTNISLTTVTNLSLNSVQATAVGMMPKMTGGLITTAVGSNSGAIGGI-GGYNATSAEEIS 297
            |.|:.:...:.|           |..| :.||.|...:  |..|:..|:..| ...|.|..:.:.
Human   527 TSGSPTAGTAAT-----------AEHV-VQPKATSAAM--AAPSSDEAMNLIKNKRNMTGYKTLP 577

  Fly   298 YKCRICEKVFGCSETLQAHEKTHKSPRYECADCGKGFSQLRNYKYHLSVHRGTKEFAAECPECGK 362
            |..:                |.:...:|||..|.|.|.||.|.|.||.||.|.:.|         
Human   578 YPLK----------------KQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGERPF--------- 617

  Fly   363 TFNDKGYLSSHLKIHRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCNECGKRFSRKMLLK 427
                                 :|..|.|.|.|......|..:|||.|||:|..|.||||....||
Human   618 ---------------------KCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLK 661

  Fly   428 QHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGC 492
            .|:|.|||||||||.||...|....::.||.|||:..:|..|..|.|.:.....||.||..:...
Human   662 THLRLHSGEKPYQCKVCPAKFTQFVHLKLHKRLHTRERPHKCSQCHKNYIHLCSLKVHLKGNCAA 726

  Fly   493 KP 494
            .|
Human   727 AP 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 1/19 (5%)
COG5048 <316..502 CDD:227381 65/179 (36%)
C2H2 Zn finger 327..347 CDD:275368 10/19 (53%)
zf-C2H2 356..377 CDD:278523 0/20 (0%)
C2H2 Zn finger 357..377 CDD:275368 0/19 (0%)
zf-H2C2_2 369..394 CDD:290200 4/24 (17%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
zf-H2C2_2 397..422 CDD:290200 12/24 (50%)
C2H2 Zn finger 413..433 CDD:275368 10/19 (53%)
zf-H2C2_2 426..449 CDD:290200 15/22 (68%)
zf-C2H2 439..461 CDD:278523 9/21 (43%)
C2H2 Zn finger 441..461 CDD:275368 7/19 (37%)
zf-C2H2 467..489 CDD:278523 7/21 (33%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
C2H2 Zn finger 497..515 CDD:275368
PRDM1XP_011534364.1 SET 114..220 CDD:214614
COG5048 <584..702 CDD:227381 56/147 (38%)
zf-C2H2 589..611 CDD:278523 12/21 (57%)
C2H2 Zn finger 591..611 CDD:275368 10/19 (53%)
zf-H2C2_2 603..628 CDD:290200 12/54 (22%)
C2H2 Zn finger 619..639 CDD:275368 6/19 (32%)
zf-H2C2_2 631..656 CDD:290200 12/24 (50%)
C2H2 Zn finger 647..667 CDD:275368 10/19 (53%)
zf-H2C2_2 659..684 CDD:290200 16/24 (67%)
C2H2 Zn finger 675..695 CDD:275368 7/19 (37%)
zf-H2C2_2 687..708 CDD:290200 8/20 (40%)
C2H2 Zn finger 703..721 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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