DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and Rslcan18

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001242981.1 Gene:Rslcan18 / 432770 MGIID:5433745 Length:460 Species:Mus musculus


Alignment Length:232 Identity:89/232 - (38%)
Similarity:117/232 - (50%) Gaps:9/232 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 EISYKCRICEKVFGCSETLQAHEKTHKSPR-YECADCGKGFSQLRNYKYHLSVHRGTKEFAAECP 358
            |..|.|.||:|.|.....|..|:|.|...: |:|..|||.|........|..:|.|.|.:  :|.
Mouse   196 EKPYTCDICDKAFSLPSILHNHQKIHTGEKPYKCEVCGKAFLMPSTLTNHQKIHTGEKPY--KCE 258

  Fly   359 ECGKTFNDKGYLSSHLKIHRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCNECGKRFSRK 423
            .|||.|.....|::|.|||...|.|||..|.|.|:....|..|.|:|||.||:||.||.|.||..
Mouse   259 VCGKAFLMPSTLTNHQKIHTGEKPYECEVCGKKFSSPADFTKHQRVHTGEKPYKCEECKKPFSNL 323

  Fly   424 MLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNY 488
            ..|.:|...|:|||.|.|..|||:::...:::.|.:.|||.|.:.|..|.|.|.....||.|...
Mouse   324 SALSRHKVVHTGEKRYTCEKCGKAYSRSYHLSRHKKAHSGQKSYKCKECGKMFYYSSDLKRHQRI 388

  Fly   489 HTGCKPYVCPHPNCNQAFTQSSNM----RTHAKKCQY 521
            |:..:||.|  ..|.:||...|::    |||.:..||
Mouse   389 HSEERPYEC--EECGKAFPSPSDVTQHARTHKRMKQY 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 8/19 (42%)
COG5048 <316..502 CDD:227381 72/186 (39%)
C2H2 Zn finger 327..347 CDD:275368 6/19 (32%)
zf-C2H2 356..377 CDD:278523 8/20 (40%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
zf-H2C2_2 369..394 CDD:290200 12/24 (50%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
zf-H2C2_2 397..422 CDD:290200 14/24 (58%)
C2H2 Zn finger 413..433 CDD:275368 8/19 (42%)
zf-H2C2_2 426..449 CDD:290200 11/22 (50%)
zf-C2H2 439..461 CDD:278523 6/21 (29%)
C2H2 Zn finger 441..461 CDD:275368 5/19 (26%)
zf-C2H2 467..489 CDD:278523 7/21 (33%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
C2H2 Zn finger 497..515 CDD:275368 6/21 (29%)
Rslcan18NP_001242981.1 KRAB 96..154 CDD:214630
KRAB 96..135 CDD:279668
COG5048 168..458 CDD:227381 89/232 (38%)
C2H2 Zn finger 173..193 CDD:275368
zf-H2C2_2 186..209 CDD:290200 6/12 (50%)
C2H2 Zn finger 201..221 CDD:275368 8/19 (42%)
zf-H2C2_2 216..236 CDD:290200 8/19 (42%)
C2H2 Zn finger 229..249 CDD:275368 6/19 (32%)
zf-H2C2_2 242..264 CDD:290200 8/23 (35%)
C2H2 Zn finger 257..277 CDD:275368 8/19 (42%)
zf-H2C2_2 270..294 CDD:290200 12/23 (52%)
C2H2 Zn finger 285..305 CDD:275368 7/19 (37%)
zf-H2C2_2 297..322 CDD:290200 14/24 (58%)
C2H2 Zn finger 313..333 CDD:275368 8/19 (42%)
zf-H2C2_2 325..350 CDD:290200 11/24 (46%)
C2H2 Zn finger 341..361 CDD:275368 5/19 (26%)
zf-H2C2_2 353..378 CDD:290200 9/24 (38%)
zf-C2H2 367..389 CDD:278523 7/21 (33%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
zf-H2C2_2 381..404 CDD:290200 8/24 (33%)
C2H2 Zn finger 397..417 CDD:275368 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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