DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15269 and CG8159

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_649823.2 Gene:CG8159 / 41040 FlyBaseID:FBgn0037619 Length:399 Species:Drosophila melanogaster


Alignment Length:234 Identity:60/234 - (25%)
Similarity:103/234 - (44%) Gaps:33/234 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 PRYECADCGKGFSQLRNYKYHLSVHRGTKEFAAECPECGKTFNDKGYLSSHLKIHRNRKEYECPY 387
            |.:.|..||...:...::..||..|.|.:.|  :|..|...|...|.|..|..:|...::::|.|
  Fly   190 PVFFCDQCGNNITGKSSFDRHLRKHSGIRPF--QCELCPARFLSSGELKGHQVMHTGDRKFQCRY 252

  Fly   388 CPKSFNQRVAFNMHVRIHTGVKPHKCNECGKRFSRKMLLKQHMRTHSGEKPYQCSVCGKSFADRS 452
            |.:::........|.|.||..:|..|.:|||.|:...:||.||..|:||:.::|.:|.:|||..:
  Fly   253 CDRTYVNYSGRLRHERTHTNDRPFICAQCGKSFTNSYILKNHMLIHTGERLFRCELCHRSFARPT 317

  Fly   453 NMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQA-FTQSSNMRTHA 516
            ::..|.|.:               |.||:|:..:....|.:  :.|..:.:|. |.........|
  Fly   318 HLKTHFRSN---------------THKHNLEKSMADAGGVQ--LSPSQSADQVKFVTEKEPEAEA 365

  Fly   517 KKCQYRPLDGLTVTSSALPVPGKQQTGPPPTLAMAMAQT 555
                    |..|:   .:|:|.:|:  ...:|.:|..:|
  Fly   366 --------DAFTI---EVPLPAEQE--QDESLGLAALET 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368
COG5048 <316..502 CDD:227381 49/178 (28%)
C2H2 Zn finger 327..347 CDD:275368 5/19 (26%)
zf-C2H2 356..377 CDD:278523 6/20 (30%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
zf-H2C2_2 369..394 CDD:290200 6/24 (25%)
C2H2 Zn finger 385..405 CDD:275368 5/19 (26%)
zf-H2C2_2 397..422 CDD:290200 10/24 (42%)
C2H2 Zn finger 413..433 CDD:275368 9/19 (47%)
zf-H2C2_2 426..449 CDD:290200 10/22 (45%)
zf-C2H2 439..461 CDD:278523 7/21 (33%)
C2H2 Zn finger 441..461 CDD:275368 7/19 (37%)
zf-C2H2 467..489 CDD:278523 4/21 (19%)
C2H2 Zn finger 469..489 CDD:275368 4/19 (21%)
C2H2 Zn finger 497..515 CDD:275368 3/18 (17%)
CG8159NP_649823.2 zf-AD 5..78 CDD:214871
C2H2 Zn finger 194..214 CDD:275368 5/19 (26%)
COG5048 <197..322 CDD:227381 39/126 (31%)
zf-H2C2_2 206..231 CDD:290200 8/26 (31%)
C2H2 Zn finger 222..242 CDD:275368 6/19 (32%)
C2H2 Zn finger 250..270 CDD:275368 5/19 (26%)
zf-H2C2_2 265..287 CDD:290200 10/21 (48%)
C2H2 Zn finger 278..298 CDD:275368 9/19 (47%)
zf-H2C2_2 291..315 CDD:290200 11/23 (48%)
C2H2 Zn finger 306..328 CDD:275368 7/36 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.