DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and Meics

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster


Alignment Length:624 Identity:162/624 - (25%)
Similarity:240/624 - (38%) Gaps:135/624 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SISKILGKERKSAQDTSTNILDL-SKSSS--------NSI----------RSPQALGGLAIPSTP 84
            |:...:||..::..:.|:.::|| ||..|        |||          ..||           
  Fly    12 SVDASMGKNCRACAEHSSILVDLFSKEISDPPIWEMLNSILPEICRVKRDEMPQ----------- 65

  Fly    85 YASGAYSMLPPDLVAMANATKF------YAQFFPHLLPAYAAAAAAAGLSTPPTSPYQTHQHQQH 143
                  .:.|..|||..||..|      ..|||..||                    |..:...:
  Fly    66 ------KICPTCLVAAQNAFHFRHKCEQSFQFFSQLL--------------------QLDKSNSN 104

  Fly   144 LPNQQKRFFAPYVINGSVPPPPPLQ--QQQQPLIR--TKSTACTRPDCPECLDYYQRLQTGGYKQ 204
            |.....|       .|::.|..|.:  ..:.||..  ||..| .|||....:|.    .|.|...
  Fly   105 LSRSHCR-------RGTMNPLIPFEIVGCEDPLDTNVTKLDA-NRPDVKTDIDE----PTDGKAT 157

  Fly   205 TAPLISPAASSVSSSTGSIRPVRDLIMSATGGAASTNISLTTVTNLSLNSVQATAVGMM-----P 264
            ......|.......:...|:...::.:..|...|....:....|:..........||..     |
  Fly   158 NGQESEPLQEVFEITMNDIKTEDEVSIQETFEDAFDEENDNNNTDSEREDSDQWTVGSTEDQDEP 222

  Fly   265 KMTGGLITTAVGSNSGAI----GGIGGYNATSA-------------EEISYKCRICEKVFGCSET 312
            .:.||.....||.|:.::    .|: .|:...|             .:..:.|..|.:.|..:..
  Fly   223 WIPGGGGRQTVGGNNQSLLCTECGV-SYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQ 286

  Fly   313 LQAHEKTHKSPR-YECADCGKGFSQLRNYKYHLSVHRGTKEFAAECPECGKTFNDKGYLSSHLKI 376
            |..|.:.|...| ::|..|.|.::.....|.|:..|  .:|...:||:|.|||..:|.|.:|::.
  Fly   287 LTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTH--DEEKGHKCPQCDKTFYTRGNLRAHIQR 349

  Fly   377 HRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCNECGKRFSRKMLLKQHMRTHSGEKPYQC 441
            |...:.|:||.||::|.:.....:|.|:|...:|.||..|||.|.:...|..|:|.|:|::.::|
  Fly   350 HTGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKC 414

  Fly   442 SVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQAF 506
            ..|.|||.::|||..|.|.|||||||.|..|.:||:..||||:||..|||.|||.|  ..|.:.|
  Fly   415 PDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKC--DQCGKGF 477

  Fly   507 TQSSNMRTHAK----------KCQYRP--LDGLTVTSSALPVPGKQQTGP--PPTL--------A 549
            :.:.::..|..          ||...|  .|    |..:|....|....|  |.||        .
  Fly   478 SANQSLMKHTLWHVDNNDRPFKCSQCPKAYD----TQQSLRGHEKTHKNPDEPKTLHQCPHCDVR 538

  Fly   550 MAMAQTFQMPPPPGVLTPGSGPSQPP---SQQTLLSNLR 585
            .|:.:|.........:.|...|..|.   ||::|..:||
  Fly   539 FALKKTLDKHITSHKIRPHPCPQCPEGFFSQKSLKKHLR 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 5/19 (26%)
COG5048 <316..502 CDD:227381 75/186 (40%)
C2H2 Zn finger 327..347 CDD:275368 5/19 (26%)
zf-C2H2 356..377 CDD:278523 9/20 (45%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
zf-H2C2_2 369..394 CDD:290200 9/24 (38%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
zf-H2C2_2 397..422 CDD:290200 10/24 (42%)
C2H2 Zn finger 413..433 CDD:275368 8/19 (42%)
zf-H2C2_2 426..449 CDD:290200 9/22 (41%)
zf-C2H2 439..461 CDD:278523 10/21 (48%)
C2H2 Zn finger 441..461 CDD:275368 10/19 (53%)
zf-C2H2 467..489 CDD:278523 11/21 (52%)
C2H2 Zn finger 469..489 CDD:275368 10/19 (53%)
C2H2 Zn finger 497..515 CDD:275368 3/17 (18%)
MeicsNP_524062.1 zf-AD 21..95 CDD:285071 21/90 (23%)
C2H2 Zn finger 242..262 CDD:275368 3/20 (15%)
C2H2 Zn finger 274..294 CDD:275368 5/19 (26%)
zf-H2C2_2 287..311 CDD:290200 7/23 (30%)
C2H2 Zn finger 302..322 CDD:275368 5/19 (26%)
C2H2 Zn finger 330..350 CDD:275368 9/19 (47%)
zf-H2C2_2 342..366 CDD:290200 8/23 (35%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
COG5048 <395..583 CDD:227381 63/189 (33%)
zf-C2H2 412..434 CDD:278523 10/21 (48%)
C2H2 Zn finger 414..434 CDD:275368 10/19 (53%)
zf-H2C2_2 426..451 CDD:290200 15/24 (63%)
C2H2 Zn finger 442..462 CDD:275368 10/19 (53%)
zf-H2C2_2 454..478 CDD:290200 13/25 (52%)
C2H2 Zn finger 470..486 CDD:275368 3/17 (18%)
C2H2 Zn finger 500..520 CDD:275368 6/23 (26%)
C2H2 Zn finger 532..552 CDD:275370 2/19 (11%)
C2H2 Zn finger 559..579 CDD:275370 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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