DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and Kah

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster


Alignment Length:296 Identity:96/296 - (32%)
Similarity:127/296 - (42%) Gaps:65/296 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 HLSVH----------RGTKEFAAE--CPECGKTFNDKGYLSSHLKIHR---NRKEYECPYCPKSF 392
            |.|||          ..|.....|  ||||||.::....|:.|.:.||   ::|...||||.|.:
  Fly    95 HSSVHHHHGEQGEILNSTSLLEDEHICPECGKKYSTSSNLARHRQTHRSIMDKKARHCPYCEKVY 159

  Fly   393 NQRVAFNMHVRIHTGVKPHKCNECGKRFSRKMLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLH 457
            ....|::||||.|.  :..:|..|||||||..||:.|:|||:||||::|.||.|:|||:||:..|
  Fly   160 VSMPAYSMHVRTHN--QGCECQFCGKRFSRPWLLQGHIRTHTGEKPFKCGVCEKAFADKSNLRAH 222

  Fly   458 HRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQAFTQSSNMRTHAKKCQYR 522
            .:.||..||.:|..|.|||..|.:|..|  ..:.|.......|....|   |.|....:.|.|..
  Fly   223 IQTHSNTKPHTCARCGKAFALKSYLYKH--EESSCMKNRGGVPGSGAA---SGNRPPSSPKRQQA 282

  Fly   523 PLDGLTVTSSALPVPGK-------QQTGPPPTLAMAM----------AQTFQ-MPPPP------- 562
            .:...|:::.|   ||.       .......|||..:          |..|| .|..|       
  Fly   283 EVTSGTISALA---PGSPAAAVCAASDSAKSTLANKLLQKEKDRRQAAMAFQGFPAGPEVTAYSH 344

  Fly   563 --------------GVLTPGSGPSQPPS-QQTLLSN 583
                          .|:.|...|.:.|| .|.||.|
  Fly   345 ATSAQEEYEKFKRINVIQPKVMPHRVPSLYQDLLPN 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368
COG5048 <316..502 CDD:227381 70/173 (40%)
C2H2 Zn finger 327..347 CDD:275368 2/3 (67%)
zf-C2H2 356..377 CDD:278523 9/22 (41%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
zf-H2C2_2 369..394 CDD:290200 10/27 (37%)
C2H2 Zn finger 385..405 CDD:275368 10/19 (53%)
zf-H2C2_2 397..422 CDD:290200 12/24 (50%)
C2H2 Zn finger 413..433 CDD:275368 12/19 (63%)
zf-H2C2_2 426..449 CDD:290200 13/22 (59%)
zf-C2H2 439..461 CDD:278523 10/21 (48%)
C2H2 Zn finger 441..461 CDD:275368 10/19 (53%)
zf-C2H2 467..489 CDD:278523 8/21 (38%)
C2H2 Zn finger 469..489 CDD:275368 8/19 (42%)
C2H2 Zn finger 497..515 CDD:275368 4/17 (24%)
KahNP_612040.1 zf-C2H2 119..141 CDD:278523 8/21 (38%)
C2H2 Zn finger 121..141 CDD:275368 8/19 (42%)
zf-C2H2 176..198 CDD:278523 12/21 (57%)
C2H2 Zn finger 178..198 CDD:275368 12/19 (63%)
zf-H2C2_2 191..214 CDD:290200 13/22 (59%)
zf-C2H2 204..226 CDD:278523 10/21 (48%)
C2H2 Zn finger 206..226 CDD:275368 10/19 (53%)
zf-H2C2_2 218..242 CDD:290200 10/23 (43%)
C2H2 Zn finger 234..250 CDD:275368 7/15 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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