DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and Zfp52

DIOPT Version :10

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001014180.1 Gene:Zfp52 / 361487 RGDID:1359149 Length:755 Species:Rattus norvegicus


Alignment Length:420 Identity:121/420 - (28%)
Similarity:181/420 - (43%) Gaps:77/420 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 YQTHQHQQHLPNQQKRFFAPYVINGSVPPPPPLQQQQQPLIRTKSTACTRPDCPEC--LDYYQRL 197
            |:.|..::  |.:.:.......:|.::.....:..:::|.   :...|.: ...:|  |..|||:
  Rat   348 YRIHTVEK--PYRYEECDTSSTVNSTLKNHQKIHTREKPY---RYRECDK-SITKCSYLRTYQRV 406

  Fly   198 QTGGYKQTAPLISPAASSVSSSTGSIRPVRDLIMSATGGAASTNISLTTVTNLSLNSVQATAVGM 262
            .||                      :||.|         ....:.|.||.:||..:  |....|.
  Rat   407 HTG----------------------MRPYR---------CTECDKSFTTYSNLRQH--QKIHTGE 438

  Fly   263 MPKMTGG-----LITTAVGSNSGAIGGIGGYNATSAE------------------EISYKCRICE 304
            .|....|     |..::|..:.....|...|......                  |..|:|:.|:
  Rat   439 KPPNCKGSDKSFLRISSVRKHQKIHAGERRYGCKECSRSFTWFSNLRVHQRVHTGERPYRCKDCD 503

  Fly   305 KVFGCSETLQAHEKTHKSPR-YECADCGKGFSQLRNYKYHLSVHRGTKEFAAECPECGKTFNDKG 368
            |.|.....|:.|:|.|...: |:|.||...|..:.|.:.|..:|.|.|.:  :|.||.|:|....
  Rat   504 KSFTTGSNLRVHQKIHTGEKPYKCKDCDISFLWISNLRTHQKIHTGEKPY--KCQECKKSFTRCS 566

  Fly   369 YLSSHLKIHRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCNECGKRFSRKMLLKQHMRTH 433
            ||..|.|||...|.|:|..|..||....:...|.:||||.||:||.||.|.|::...|:.|.:.|
  Rat   567 YLRDHQKIHTGEKLYKCKDCNVSFMWISSLRRHQKIHTGEKPYKCRECEKSFTQCSTLRDHQKIH 631

  Fly   434 SGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCP 498
            :|||||:|..|..||...|::..|.::|:|.||:.|.:|..:|....:||||...|||.|||.| 
  Rat   632 TGEKPYKCKDCDISFLWISSLRRHQKIHTGEKPYKCKVCGISFLWISNLKTHQKIHTGEKPYKC- 695

  Fly   499 HPNCNQAFTQSSNMRTHAK--------KCQ 520
             ..||::||:.|.:|.|.|        ||:
  Rat   696 -QECNKSFTRCSYLRVHQKTHTGEKPYKCK 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
C2H2 Zn finger 327..347 CDD:275368 6/19 (32%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
COG5048 <370..515 CDD:227381 62/144 (43%)
C2H2 Zn finger 385..405 CDD:275368 5/19 (26%)
C2H2 Zn finger 413..433 CDD:275368 7/19 (37%)
C2H2 Zn finger 441..461 CDD:275368 6/19 (32%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
C2H2 Zn finger 497..515 CDD:275368 7/17 (41%)
Zfp52NP_001014180.1 KRAB 44..84 CDD:460171
C2H2 Zn finger 219..239 CDD:275368
SFP1 <241..324 CDD:227516
C2H2 Zn finger 247..295 CDD:275368
C2H2 Zn finger 303..323 CDD:275368
COG5048 329..702 CDD:227381 113/396 (29%)
C2H2 Zn finger 331..351 CDD:275368 1/2 (50%)
C2H2 Zn finger 359..379 CDD:275368 1/19 (5%)
C2H2 Zn finger 388..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 6/21 (29%)
C2H2 Zn finger 443..463 CDD:275370 3/19 (16%)
C2H2 Zn finger 471..491 CDD:275368 0/19 (0%)
C2H2 Zn finger 499..519 CDD:275368 7/19 (37%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
C2H2 Zn finger 583..603 CDD:275368 5/19 (26%)
C2H2 Zn finger 611..631 CDD:275368 7/19 (37%)
C2H2 Zn finger 639..659 CDD:275368 6/19 (32%)
C2H2 Zn finger 667..687 CDD:275368 7/19 (37%)
C2H2 Zn finger 695..715 CDD:275368 9/21 (43%)
zf-H2C2_2 707..730 CDD:463886 5/18 (28%)
C2H2 Zn finger 723..743 CDD:275368 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.

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