DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and Zfp52

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001014180.1 Gene:Zfp52 / 361487 RGDID:1359149 Length:755 Species:Rattus norvegicus


Alignment Length:420 Identity:121/420 - (28%)
Similarity:181/420 - (43%) Gaps:77/420 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 YQTHQHQQHLPNQQKRFFAPYVINGSVPPPPPLQQQQQPLIRTKSTACTRPDCPEC--LDYYQRL 197
            |:.|..::  |.:.:.......:|.::.....:..:::|.   :...|.: ...:|  |..|||:
  Rat   348 YRIHTVEK--PYRYEECDTSSTVNSTLKNHQKIHTREKPY---RYRECDK-SITKCSYLRTYQRV 406

  Fly   198 QTGGYKQTAPLISPAASSVSSSTGSIRPVRDLIMSATGGAASTNISLTTVTNLSLNSVQATAVGM 262
            .||                      :||.|         ....:.|.||.:||..:  |....|.
  Rat   407 HTG----------------------MRPYR---------CTECDKSFTTYSNLRQH--QKIHTGE 438

  Fly   263 MPKMTGG-----LITTAVGSNSGAIGGIGGYNATSAE------------------EISYKCRICE 304
            .|....|     |..::|..:.....|...|......                  |..|:|:.|:
  Rat   439 KPPNCKGSDKSFLRISSVRKHQKIHAGERRYGCKECSRSFTWFSNLRVHQRVHTGERPYRCKDCD 503

  Fly   305 KVFGCSETLQAHEKTHKSPR-YECADCGKGFSQLRNYKYHLSVHRGTKEFAAECPECGKTFNDKG 368
            |.|.....|:.|:|.|...: |:|.||...|..:.|.:.|..:|.|.|.:  :|.||.|:|....
  Rat   504 KSFTTGSNLRVHQKIHTGEKPYKCKDCDISFLWISNLRTHQKIHTGEKPY--KCQECKKSFTRCS 566

  Fly   369 YLSSHLKIHRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCNECGKRFSRKMLLKQHMRTH 433
            ||..|.|||...|.|:|..|..||....:...|.:||||.||:||.||.|.|::...|:.|.:.|
  Rat   567 YLRDHQKIHTGEKLYKCKDCNVSFMWISSLRRHQKIHTGEKPYKCRECEKSFTQCSTLRDHQKIH 631

  Fly   434 SGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCP 498
            :|||||:|..|..||...|::..|.::|:|.||:.|.:|..:|....:||||...|||.|||.| 
  Rat   632 TGEKPYKCKDCDISFLWISSLRRHQKIHTGEKPYKCKVCGISFLWISNLKTHQKIHTGEKPYKC- 695

  Fly   499 HPNCNQAFTQSSNMRTHAK--------KCQ 520
             ..||::||:.|.:|.|.|        ||:
  Rat   696 -QECNKSFTRCSYLRVHQKTHTGEKPYKCK 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
COG5048 <316..502 CDD:227381 75/186 (40%)
C2H2 Zn finger 327..347 CDD:275368 6/19 (32%)
zf-C2H2 356..377 CDD:278523 9/20 (45%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
zf-H2C2_2 369..394 CDD:290200 12/24 (50%)
C2H2 Zn finger 385..405 CDD:275368 5/19 (26%)
zf-H2C2_2 397..422 CDD:290200 13/24 (54%)
C2H2 Zn finger 413..433 CDD:275368 7/19 (37%)
zf-H2C2_2 426..449 CDD:290200 11/22 (50%)
zf-C2H2 439..461 CDD:278523 7/21 (33%)
C2H2 Zn finger 441..461 CDD:275368 6/19 (32%)
zf-C2H2 467..489 CDD:278523 7/21 (33%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
C2H2 Zn finger 497..515 CDD:275368 7/17 (41%)
Zfp52NP_001014180.1 KRAB 44..84 CDD:396083
C2H2 Zn finger 219..239 CDD:275368
SFP1 <241..324 CDD:227516
C2H2 Zn finger 247..295 CDD:275368
C2H2 Zn finger 303..323 CDD:275368
COG5048 329..702 CDD:227381 113/396 (29%)
C2H2 Zn finger 331..351 CDD:275368 1/2 (50%)
C2H2 Zn finger 359..379 CDD:275368 1/19 (5%)
C2H2 Zn finger 388..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 6/21 (29%)
C2H2 Zn finger 443..463 CDD:275370 3/19 (16%)
C2H2 Zn finger 471..491 CDD:275368 0/19 (0%)
C2H2 Zn finger 499..519 CDD:275368 7/19 (37%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
C2H2 Zn finger 583..603 CDD:275368 5/19 (26%)
C2H2 Zn finger 611..631 CDD:275368 7/19 (37%)
C2H2 Zn finger 639..659 CDD:275368 6/19 (32%)
C2H2 Zn finger 667..687 CDD:275368 7/19 (37%)
C2H2 Zn finger 695..715 CDD:275368 9/21 (43%)
zf-H2C2_2 707..730 CDD:404364 5/18 (28%)
C2H2 Zn finger 723..743 CDD:275368 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24384
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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