DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and lst-5

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_872063.2 Gene:lst-5 / 353399 WormBaseID:WBGene00016890 Length:346 Species:Caenorhabditis elegans


Alignment Length:161 Identity:45/161 - (27%)
Similarity:70/161 - (43%) Gaps:16/161 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 HKSPRYECADCGKGFSQLRNYKYH-LSVHRGTKEF-----AAECPECGKTFNDKGYLSSHLKIHR 378
            ||  .|:|.:|.:.|:...|.:.| :..|.|.|..     :::|..|||.::....|:.|:....
 Worm   106 HK--EYQCDECDRMFTLKHNLQNHFVQYHMGCKTLHKACVSSKCDICGKIYSAVSVLAEHMLNEH 168

  Fly   379 NR--KEYECPYCPKSFNQRVAFNMHVRIHTGVKPH----KCNECGKRFSRKMLLKQHMRTHSGEK 437
            ||  .:.|||.|.:.|..:.|...|::.|...:.|    :|.....||:|:  |.:|:|.....|
 Worm   169 NRYLDQIECPDCHEFFLTQTALQKHMKEHKREEKHCPYKECRGIKFRFNRE--LNEHVRLQHKSK 231

  Fly   438 PYQCSVCGKSFADRSNMTLHHRLHSGIKPFS 468
            ...|.||...|...|....|.:.|....|.|
 Worm   232 ELSCCVCNMVFRQLSAKIKHEKTHEKGSPIS 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 45/161 (28%)
COG5048 <316..502 CDD:227381 45/161 (28%)
C2H2 Zn finger 327..347 CDD:275368 5/20 (25%)
zf-C2H2 356..377 CDD:278523 6/20 (30%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
zf-H2C2_2 369..394 CDD:290200 9/26 (35%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
zf-H2C2_2 397..422 CDD:290200 7/28 (25%)
C2H2 Zn finger 413..433 CDD:275368 7/19 (37%)
zf-H2C2_2 426..449 CDD:290200 7/22 (32%)
zf-C2H2 439..461 CDD:278523 6/21 (29%)
C2H2 Zn finger 441..461 CDD:275368 6/19 (32%)
zf-C2H2 467..489 CDD:278523 1/2 (50%)
C2H2 Zn finger 469..489 CDD:275368 45/161 (28%)
C2H2 Zn finger 497..515 CDD:275368
lst-5NP_872063.2 C2H2 Zn finger 111..132 CDD:275368 5/20 (25%)
C2H2 Zn finger 147..168 CDD:275368 6/20 (30%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 208..227 CDD:275368 7/20 (35%)
C2H2 Zn finger 235..255 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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