DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15269 and Gzf1

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001101258.1 Gene:Gzf1 / 311508 RGDID:1562321 Length:707 Species:Rattus norvegicus


Alignment Length:272 Identity:93/272 - (34%)
Similarity:138/272 - (50%) Gaps:28/272 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 YNATSAEEISYKCRICEKVFGCSETLQAHEK-THKSPR-YECADCGKGFSQLRNYKYH-LSVHRG 349
            |:...|.|:.|:|..|.:.|.....|::|:: .|.|.| :.|..|.|.|.:.::.|.| |.||.|
  Rat   337 YHHGVATEVVYRCDTCGQTFANRCNLKSHQRHVHSSERHFPCEMCAKKFKRKKDVKRHVLQVHEG 401

  Fly   350 TKEFAAECPECGKTFNDKGYLSSHLKIHRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCN 414
            ..| ...|.:|||..:.|..|..|.:.|...|.|.|..|...|:|..|...|:|:|||.:|..|:
  Rat   402 GGE-RHRCGQCGKGLSSKTALRLHERTHTGDKPYGCTKCDAKFSQPSALKTHLRVHTGERPFVCD 465

  Fly   415 ECGKRFSRKMLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKK 479
            |||.||::..:|..|.|.|:||:|:.|..||||||.:..:..|:|:|:|.|||.|.:|.:.|.::
  Rat   466 ECGARFTQNHMLIYHKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCLRTFAQR 530

  Fly   480 HHLKTHLNYHTGCKPYVCPHPNCNQAFTQSSNMRTHAKKCQYRPLDGLTVTSSALPVPGKQQTGP 544
            :.|..|:..|||.:||.|  ..|.:.|||.:.::.|                      .:..||.
  Rat   531 NSLYQHIKVHTGERPYCC--DQCGKQFTQVNALQRH----------------------HRIHTGE 571

  Fly   545 PPTLAMAMAQTF 556
            .|.:..|..:||
  Rat   572 KPYMCNACGRTF 583

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 5/20 (25%)
COG5048 <316..502 CDD:227381 74/188 (39%)
C2H2 Zn finger 327..347 CDD:275368 7/20 (35%)
zf-C2H2 356..377 CDD:278523 7/20 (35%)
C2H2 Zn finger 357..377 CDD:275368 7/19 (37%)
zf-H2C2_2 369..394 CDD:290200 8/24 (33%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
zf-H2C2_2 397..422 CDD:290200 13/24 (54%)
C2H2 Zn finger 413..433 CDD:275368 9/19 (47%)
zf-H2C2_2 426..449 CDD:290200 12/22 (55%)
zf-C2H2 439..461 CDD:278523 9/21 (43%)
C2H2 Zn finger 441..461 CDD:275368 9/19 (47%)
zf-C2H2 467..489 CDD:278523 6/21 (29%)
C2H2 Zn finger 469..489 CDD:275368 5/19 (26%)
C2H2 Zn finger 497..515 CDD:275368 5/17 (29%)
Gzf1NP_001101258.1 BTB 21..125 CDD:279045
BTB 32..125 CDD:197585
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 149..221
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..309