DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and Zkscan8

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001094044.1 Gene:Zkscan8 / 306974 RGDID:1308983 Length:588 Species:Rattus norvegicus


Alignment Length:453 Identity:136/453 - (30%)
Similarity:193/453 - (42%) Gaps:80/453 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 LLPAYAAAAAAAGLSTPPTSPYQTHQHQQHLPNQQKRFFAPYVINGSVPPPPPLQQQQQPLIRTK 178
            ::|:.:|       |.||:.      |.|.:....|          |..|..|..:.::|....|
  Rat   155 VIPSKSA-------SEPPSI------HVQPMATMPK----------SPVPQKPHDRGERPDFTYK 196

  Fly   179 STACTRPDCPE------CLDYYQRLQTGGYKQTAPLISPAASSVSSSTGSIRP-VRDLIMSATGG 236
            :.:.::...|.      ..:...||.|.|: ||...|...|.|:......:.| .:||.......
  Rat   197 AMSSSQKPTPSQKGSSGDQEVTARLLTAGF-QTLEKIEDMAVSLIREEWLLDPSQKDLNRDNRPE 260

  Fly   237 AASTNISL---TTVTNLSLNSVQATAVGMMP------KMTGGLITTAVGSNSGAIGGIGGY---- 288
            ......||   |...|..|.|.|..:..:.|      |..|.:|   ||...|....:.|.    
  Rat   261 KYRNMFSLDGETRNENKELFSKQVISPRIQPHGEATAKCNGDII---VGLEHGETQDLLGKLERH 322

  Fly   289 --NATSAE--------------------------EISYKCRICEKVFGCSETLQAHEKTH-KSPR 324
              |.|..:                          |..|:|.:|.|.|.....|.:|:..| |..|
  Rat   323 QGNHTQEKRHKCDECGKSFAQNSGLVRHWRIHTGEKPYQCNVCSKAFSYRSALLSHQDIHNKVKR 387

  Fly   325 YECADCGKGFSQLRNYKYHLSVHRGTKEFAAECPECGKTFNDKGYLSSHLKIHRNRKEYECPYCP 389
            |.|.:|||.|||......|..:|.|.|.:  :|.:|||.|:....|..|.:||...:.|||..|.
  Rat   388 YHCKECGKAFSQNTGLILHQRIHTGEKPY--QCNQCGKAFSQSAGLILHQRIHSGERPYECNECG 450

  Fly   390 KSFNQRVAFNMHVRIHTGVKPHKCNECGKRFSRKMLLKQHMRTHSGEKPYQCSVCGKSFADRSNM 454
            |:|:.......|.|||||.||::|:||||.|.|...|..|.|:|:|||||:|:.||::|:.:|.:
  Rat   451 KAFSHSSHLIGHQRIHTGEKPYECDECGKTFRRSSHLIGHQRSHTGEKPYKCNECGRAFSQKSGL 515

  Fly   455 TLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQAFTQSSNMRTHAK 517
            ..|.|:|:|.:|:.|..|.|||.....|..||..|||.|||.|  ..|.:||.|.|::..|.:
  Rat   516 IEHQRIHTGERPYKCKECGKAFNGNTGLIQHLRIHTGEKPYKC--NECGKAFIQRSSLIRHQR 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 6/19 (32%)
COG5048 <316..502 CDD:227381 80/186 (43%)
C2H2 Zn finger 327..347 CDD:275368 8/19 (42%)
zf-C2H2 356..377 CDD:278523 7/20 (35%)
C2H2 Zn finger 357..377 CDD:275368 7/19 (37%)
zf-H2C2_2 369..394 CDD:290200 10/24 (42%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
zf-H2C2_2 397..422 CDD:290200 14/24 (58%)
C2H2 Zn finger 413..433 CDD:275368 10/19 (53%)
zf-H2C2_2 426..449 CDD:290200 12/22 (55%)
zf-C2H2 439..461 CDD:278523 8/21 (38%)
C2H2 Zn finger 441..461 CDD:275368 7/19 (37%)
zf-C2H2 467..489 CDD:278523 8/21 (38%)
C2H2 Zn finger 469..489 CDD:275368 8/19 (42%)
C2H2 Zn finger 497..515 CDD:275368 6/17 (35%)
Zkscan8NP_001094044.1 SCAN 48..158 CDD:128708 0/2 (0%)
SCAN 48..133 CDD:280241
KRAB_A-box 230..268 CDD:143639 6/37 (16%)
zf-H2C2_2 319..343 CDD:290200 2/23 (9%)
COG5048 <322..574 CDD:227381 94/255 (37%)
C2H2 Zn finger 334..354 CDD:275368 0/19 (0%)
zf-H2C2_2 347..371 CDD:290200 6/23 (26%)
C2H2 Zn finger 364..382 CDD:275368 5/17 (29%)
zf-H2C2_2 374..399 CDD:290200 11/24 (46%)
zf-C2H2 388..410 CDD:278523 9/21 (43%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
zf-H2C2_2 406..427 CDD:290200 9/22 (41%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
zf-H2C2_2 434..455 CDD:290200 9/20 (45%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
zf-H2C2_2 462..483 CDD:290200 14/20 (70%)
C2H2 Zn finger 474..494 CDD:275368 10/19 (53%)
zf-H2C2_2 490..511 CDD:290200 12/20 (60%)
C2H2 Zn finger 502..522 CDD:275368 7/19 (37%)
zf-H2C2_2 515..538 CDD:290200 9/22 (41%)
C2H2 Zn finger 530..550 CDD:275368 8/19 (42%)
zf-H2C2_2 543..567 CDD:290200 13/25 (52%)
C2H2 Zn finger 558..578 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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