DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and Zfp418

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_006228239.1 Gene:Zfp418 / 292548 RGDID:1311663 Length:670 Species:Rattus norvegicus


Alignment Length:463 Identity:132/463 - (28%)
Similarity:179/463 - (38%) Gaps:122/463 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 HLLPAYAAAAAAAGLSTPPTSPYQTHQHQQHLPNQQKRFFAPYVINGSVPPPPPLQQQQQPLIRT 177
            |.|..|....:|.|       .::::..:|.|             |...|.|..:.|.:      
  Rat   232 HRLHEYPGVCSAKG-------GFESNSCEQDL-------------NKYSPAPFRMDQTE------ 270

  Fly   178 KSTACTRP-DCPEC---------LDYYQRLQTG--GYKQTAPLISPAASSVSSST---------G 221
                 .|| :|..|         |..:||..||  .||     ......|...|:         .
  Rat   271 -----NRPYECHVCGKWFGQKATLRIHQRRHTGEKPYK-----CGECGKSFCQSSNLSEHCRVHS 325

  Fly   222 SIRPVRDLIMSATGGAASTNISLTTVTNLSLNSVQATAVGMMP----------KMTGGLITTAVG 276
            ..||...|......|..|           ||...|.|..|..|          :....|||    
  Rat   326 GERPFECLECGKAFGCHS-----------SLLRHQRTHTGEWPYECSDCGRLFRQIVSLIT---- 375

  Fly   277 SNSGAIGGIGGYNATSAEEISYKCRICEKVFGCSETLQAHEKTHKSPR-YECADCGKGFSQLRNY 340
                       :..|...|..|:|..|||.|....||..|::.|...: |.|..|||.|||..|.
  Rat   376 -----------HQRTHTTEKPYECGQCEKSFSHKATLTVHQRVHTGEKPYHCEACGKSFSQSANL 429

  Fly   341 KYHLSVHRGTKEFAA--------------------------ECPECGKTFNDKGYLSSHLKIHRN 379
            ..|..:|.|.|.:..                          ||.||||.|....||..|.:||..
  Rat   430 IKHSKIHTGEKPYECGECGLCFRQRATLMKHQRTHTSERPYECRECGKFFKQYFYLIEHRRIHTT 494

  Fly   380 RKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCNECGKRFSRKMLLKQHMRTHSGEKPYQCSVC 444
            .:.|||..|.||:.|:.....|.|:|||..|:||.||||.|..|..||:|.|||:||:||:|:.|
  Rat   495 TEFYECEQCGKSYTQKATLIRHQRVHTGESPYKCEECGKAFEYKSRLKRHQRTHTGERPYECAKC 559

  Fly   445 GKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQAFTQS 509
            ||.|.:..|:..|.::|:..||:.|..|.|.|:::..|..|...|||.:||.|  ..|.:.|:::
  Rat   560 GKFFRESYNLAEHQKIHTKAKPYHCDQCGKCFSRRADLVKHQRVHTGERPYTC--GECGKTFSRT 622

  Fly   510 SNMRTHAK 517
            :|:..|.:
  Rat   623 TNLVQHRR 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 8/19 (42%)
COG5048 <316..502 CDD:227381 80/212 (38%)
C2H2 Zn finger 327..347 CDD:275368 9/19 (47%)
zf-C2H2 356..377 CDD:278523 10/20 (50%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
zf-H2C2_2 369..394 CDD:290200 11/24 (46%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
zf-H2C2_2 397..422 CDD:290200 13/24 (54%)
C2H2 Zn finger 413..433 CDD:275368 11/19 (58%)
zf-H2C2_2 426..449 CDD:290200 14/22 (64%)
zf-C2H2 439..461 CDD:278523 8/21 (38%)
C2H2 Zn finger 441..461 CDD:275368 7/19 (37%)
zf-C2H2 467..489 CDD:278523 6/21 (29%)
C2H2 Zn finger 469..489 CDD:275368 6/19 (32%)
C2H2 Zn finger 497..515 CDD:275368 4/17 (24%)
Zfp418XP_006228239.1 KRAB 35..>76 CDD:214630
KRAB 35..74 CDD:279668
COG5048 <190..396 CDD:227381 45/225 (20%)
C2H2 Zn finger 276..296 CDD:275368 5/19 (26%)
zf-H2C2_2 289..311 CDD:290200 7/26 (27%)
COG5048 300..657 CDD:227381 112/364 (31%)
C2H2 Zn finger 304..324 CDD:275368 2/19 (11%)
zf-H2C2_2 316..339 CDD:290200 3/22 (14%)
C2H2 Zn finger 332..352 CDD:275368 6/30 (20%)
zf-H2C2_2 344..369 CDD:290200 6/24 (25%)
C2H2 Zn finger 360..380 CDD:275368 3/34 (9%)
zf-H2C2_2 372..397 CDD:290200 11/39 (28%)
C2H2 Zn finger 388..408 CDD:275368 8/19 (42%)
zf-H2C2_2 401..425 CDD:290200 9/23 (39%)
C2H2 Zn finger 416..436 CDD:275368 9/19 (47%)
C2H2 Zn finger 444..464 CDD:275368 0/19 (0%)
zf-H2C2_2 457..481 CDD:290200 7/23 (30%)
C2H2 Zn finger 472..492 CDD:275368 9/19 (47%)
C2H2 Zn finger 500..520 CDD:275368 7/19 (37%)
zf-H2C2_2 513..537 CDD:290200 13/23 (57%)
C2H2 Zn finger 528..548 CDD:275368 11/19 (58%)
zf-H2C2_2 541..563 CDD:290200 14/21 (67%)
C2H2 Zn finger 556..576 CDD:275368 7/19 (37%)
zf-H2C2_2 568..593 CDD:290200 9/24 (38%)
C2H2 Zn finger 584..604 CDD:275368 6/19 (32%)
zf-H2C2_2 596..621 CDD:290200 10/26 (38%)
C2H2 Zn finger 612..632 CDD:275368 5/21 (24%)
zf-H2C2_2 624..649 CDD:290200 2/7 (29%)
C2H2 Zn finger 640..660 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24384
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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