DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and Rbak

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001178593.1 Gene:Rbak / 288489 RGDID:1562875 Length:711 Species:Rattus norvegicus


Alignment Length:422 Identity:129/422 - (30%)
Similarity:181/422 - (42%) Gaps:97/422 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 PLISPA--ASSVSSSTGSIRPVRDLIMS----------------------------ATGGAASTN 241
            |||||:  |.|..|...::..|.:||.|                            :.|.::..:
  Rat   125 PLISPSSGAHSCVSCGKTLESVTELICSDGSYAVEKPDKCFECGKGYRENPEDLNQSEGNSSERD 189

  Fly   242 IS-LTTVTNLS-------LNSVQATAV---------GMMPKMTGGLITTAVGSNSGAIGGIGGYN 289
            .| |..:|.|.       |.::...:|         |..|....|     .|.:...|.....|:
  Rat   190 ESILQKITILEKPFDYECLEALDRESVFMAHERAYMGEKPYEWNG-----SGPDFIQISDFSTYH 249

  Fly   290 ATSAEEISYKCRICEKVFGCSETLQAHEKTHKSPR-YECADCGKGFSQLRNYKYHLSVHRGT--K 351
            .:..|...::|..|.|.|........|::.|...: |.|..|||.|||    |..|:|||.:  :
  Rat   250 RSQVEMKPFECTQCGKSFCKKSKFIIHQRAHTGEKPYACGVCGKSFSQ----KGTLTVHRRSHLE 310

  Fly   352 EFAAECPECGKTFNDKGYLSSHLKIHRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCNEC 416
            |...:|.||||||..|.:|:.|.:.|...|.|||..|.|:|.|:....:|.|.|:|.:|:.|:||
  Rat   311 EKPYKCDECGKTFCQKLHLTQHQRTHSGEKPYECSECGKTFCQKTHLTLHQRNHSGERPYPCSEC 375

  Fly   417 GKRFSRKMLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHH 481
            ||.||||..|..|.|||:|||.|.|:.||||:..:|.:..|.|.|:|.||:.|..|.|.|::..:
  Rat   376 GKSFSRKSALNDHQRTHTGEKLYTCNECGKSYYRKSTLITHQRTHTGEKPYQCSECGKFFSRVSY 440

  Fly   482 LKTHLNYHTGCKPYVCPHP----NCNQAFTQSSNMRTHAK-------------KCQYRP--LDGL 527
            |..|...|...|||.|...    |.|.|||:  :.:.||:             :.||.|  .|||
  Rat   441 LTIHYRSHLEEKPYECTECGKTFNLNSAFTR--HRKAHAEERVQECGECGKPSRLQYLPDHADGL 503

  Fly   528 -----------------TVTSSALPVPGKQQT 542
                             :..|...|||..::|
  Rat   504 GEKHHGCNECGKTFLENSAFSRHQPVPEGEKT 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 5/19 (26%)
COG5048 <316..502 CDD:227381 81/192 (42%)
C2H2 Zn finger 327..347 CDD:275368 9/19 (47%)
zf-C2H2 356..377 CDD:278523 10/20 (50%)
C2H2 Zn finger 357..377 CDD:275368 10/19 (53%)
zf-H2C2_2 369..394 CDD:290200 10/24 (42%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
zf-H2C2_2 397..422 CDD:290200 11/24 (46%)
C2H2 Zn finger 413..433 CDD:275368 12/19 (63%)
zf-H2C2_2 426..449 CDD:290200 14/22 (64%)
zf-C2H2 439..461 CDD:278523 9/21 (43%)
C2H2 Zn finger 441..461 CDD:275368 8/19 (42%)
zf-C2H2 467..489 CDD:278523 6/21 (29%)
C2H2 Zn finger 469..489 CDD:275368 6/19 (32%)
C2H2 Zn finger 497..515 CDD:275368 6/21 (29%)
RbakNP_001178593.1 KRAB 8..68 CDD:214630
KRAB 8..47 CDD:279668
COG5048 255..694 CDD:227381 103/287 (36%)
C2H2 Zn finger 260..280 CDD:275368 5/19 (26%)
C2H2 Zn finger 288..308 CDD:275368 12/23 (52%)
zf-H2C2_2 301..323 CDD:290200 10/21 (48%)
zf-C2H2 314..336 CDD:278523 10/21 (48%)
C2H2 Zn finger 316..336 CDD:275368 10/19 (53%)
zf-H2C2_2 328..351 CDD:290200 9/22 (41%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
zf-H2C2_2 356..381 CDD:290200 11/24 (46%)
C2H2 Zn finger 372..392 CDD:275368 12/19 (63%)
zf-C2H2 398..420 CDD:278523 9/21 (43%)
C2H2 Zn finger 400..420 CDD:275368 8/19 (42%)
zf-H2C2_2 413..437 CDD:290200 10/23 (43%)
C2H2 Zn finger 428..448 CDD:275368 6/19 (32%)
C2H2 Zn finger 456..476 CDD:275368 6/21 (29%)
C2H2 Zn finger 510..530 CDD:275368 2/19 (11%)
C2H2 Zn finger 538..558 CDD:275368
C2H2 Zn finger 566..586 CDD:275368
zf-H2C2_2 578..603 CDD:290200
C2H2 Zn finger 594..614 CDD:275368
zf-H2C2_2 606..631 CDD:290200
C2H2 Zn finger 622..642 CDD:275368
zf-H2C2_2 634..659 CDD:290200
C2H2 Zn finger 650..670 CDD:275368
zf-H2C2_2 662..687 CDD:290200
C2H2 Zn finger 678..698 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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