DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15269 and Zfp263

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_006245892.1 Gene:Zfp263 / 287076 RGDID:1307301 Length:680 Species:Rattus norvegicus


Alignment Length:265 Identity:90/265 - (33%)
Similarity:135/265 - (50%) Gaps:37/265 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 GGY------NATSAEEISYKCRICEKVFGCSETLQAHEKTHKSPR-YECADCGKGFSQLRNYKYH 343
            ||:      :.|...|.::||..|.|.|..:..|..|::||...: ::|..|||.||...|...|
  Rat   416 GGHPHFLSLHRTHVGEEAHKCLECGKCFSQNTHLTRHQRTHTGEKPFQCNVCGKSFSCNSNLNRH 480

  Fly   344 LSVHRGTKEFAAECPECGKTFNDKGYLSSHLKIHRNRKEYECPYCPKSFNQRVAFNMHVRIH--- 405
            ...|.|.|.:  :|||||:.|.....|..|.:||...:.|.|..|.|||::.....:|.|.|   
  Rat   481 QRTHTGEKPY--KCPECGEIFAHSSNLLRHQRIHTGERPYRCSECGKSFSRSSHLVIHERTHEKE 543

  Fly   406 ---------TGV--------------KPHKCNECGKRFSRKMLLKQHMRTHSGEKPYQCSVCGKS 447
                     .|:              |..:|:.|||.|.:.|.|.:|.|||:|||||:|.:||::
  Rat   544 RLDPLPECGQGINDSAPFLTNHRVEKKLFECSTCGKSFRQGMHLTRHQRTHTGEKPYKCILCGEN 608

  Fly   448 FADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQAFTQSSNM 512
            |:.|||:..|.|:|:|.||::|..|..:|:...:...||..|||.:||.|  ..|.::|::||.:
  Rat   609 FSHRSNLIRHQRIHTGEKPYTCHECGDSFSHSSNRIRHLRTHTGERPYKC--SECGESFSRSSRL 671

  Fly   513 RTHAK 517
            .:|.:
  Rat   672 TSHQR 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 6/19 (32%)
COG5048 <316..502 CDD:227381 75/212 (35%)
C2H2 Zn finger 327..347 CDD:275368 8/19 (42%)
zf-C2H2 356..377 CDD:278523 8/20 (40%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
zf-H2C2_2 369..394 CDD:290200 10/24 (42%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
zf-H2C2_2 397..422 CDD:290200 10/50 (20%)
C2H2 Zn finger 413..433 CDD:275368 9/19 (47%)
zf-H2C2_2 426..449 CDD:290200 13/22 (59%)
zf-C2H2 439..461 CDD:278523 10/21 (48%)
C2H2 Zn finger 441..461 CDD:275368 9/19 (47%)
zf-C2H2 467..489 CDD:278523 5/21 (24%)
C2H2 Zn finger 469..489 CDD:275368 5/19 (26%)
C2H2 Zn finger 497..515 CDD:275368 5/17 (29%)
Zfp263XP_006245892.1 SCAN 41..151 CDD:128708
SCAN 41..127 CDD:280241
KRAB 220..278 CDD:214630
KRAB 220..257 CDD:279668
COG5048 <367..531 CDD:227381 40/116 (34%)
C2H2 Zn finger 380..400 CDD:275368
zf-C2H2 380..400 CDD:278523
zf-C2H2 434..456 CDD:278523 7/21 (33%)
C2H2 Zn finger 436..456 CDD:275368 6/19 (32%)
zf-H2C2_2 448..473 CDD:290200 9/24 (38%)
COG5048 <460..646 CDD:227381 64/187 (34%)
C2H2 Zn finger 464..484 CDD:275368 8/19 (42%)
zf-H2C2_2 476..501 CDD:290200 11/26 (42%)
C2H2 Zn finger 492..512 CDD:275368 8/19 (42%)
zf-H2C2_2 504..529 CDD:290200 10/24 (42%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
zf-C2H2 572..594 CDD:278523 9/21 (43%)
C2H2 Zn finger 574..594 CDD:275368 9/19 (47%)
zf-H2C2_2 586..611 CDD:290200 14/24 (58%)
C2H2 Zn finger 602..622 CDD:275368 9/19 (47%)
zf-H2C2_2 614..639 CDD:290200 10/24 (42%)
COG5048 626..>679 CDD:227381 18/53 (34%)
C2H2 Zn finger 630..650 CDD:275368 5/19 (26%)
zf-H2C2_2 645..667 CDD:290200 10/23 (43%)
C2H2 Zn finger 658..678 CDD:275368 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.