DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and row-1

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001122473.1 Gene:row-1 / 172928 WormBaseID:WBGene00009508 Length:584 Species:Caenorhabditis elegans


Alignment Length:385 Identity:89/385 - (23%)
Similarity:125/385 - (32%) Gaps:118/385 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 QQQPLIRTKSTAC----TRPDCPECLDYYQRLQTGGYKQTAPLISPAASSVSSSTGSIRPVRDLI 230
            :.||..|......    :||..|               .||.|.:|......::.|..||... :
 Worm    65 KNQPAFRGNEIPTGIRNSRPSLP---------------ATAILQNPQFLVQLAAKGLKRPFSS-V 113

  Fly   231 MSATGGAASTNISLTTVTNLSLNSVQATAVGMMPKM-TGGLITTAVGS----------NSGAIGG 284
            .|......||:|..|.      |:..|   |..|.: .|..:..|..|          |:..|.|
 Worm   114 HSTPAVVPSTSIQRTR------NNQNA---GNTPNIYKGHYMFEATESYEPSRRSSRYNTKKIEG 169

  Fly   285 --IGGYNATSAEEISYKC-RICEKVFGCSETLQAHEKTHKSP-----RYECADCGKGFSQLRN-- 339
              :..||.|       || ::|..|......:.|| ..|..|     :.|..|.|.....|||  
 Worm   170 KFMCSYNPT-------KCYKLCGSVVEVINHIWAH-VIHDPPLPPIEKKESKDDGMFSCLLRNSD 226

  Fly   340 -----YKYHLSVHRGTKEFAAECPECGKTFNDKGYLSSHLK-IH-------RNRKEYECPYCPKS 391
                 ....||:.|     ...|..|...|.     :.||| ||       ::..:..|..|...
 Worm   227 AAQLAENSALSLKR-----LQTCQFCNAVFR-----TVHLKTIHVVKCHMEQDHLDTTCNICELD 281

  Fly   392 FNQRVAFNMHVRIH-TGVKPHKCNECGKRFSRKMLLKQH-MRTHSGE-KPYQCSVCGKSFADRSN 453
            |...:|.|.|::.| :|..|:.|.:|..|.|.:....|| :..||.: :...|.:|         
 Worm   282 FGNSIALNTHMKKHISGEAPYNCQKCKYRTSVRAFFYQHFIEKHSNDSRTLLCPIC--------- 337

  Fly   454 MTLHH----------------------RLHSGIKPFSCPLCPKAFTKKHHLKTH-LNYHT 490
              |||                      |.|:......|.:|...||.:..|:.| .|.||
 Worm   338 --LHHEDLRPNVRRSKHIFVREFVNHMRSHALGPQMRCHVCALTFTSRLLLEAHRTNDHT 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 5/20 (25%)
COG5048 <316..502 CDD:227381 53/221 (24%)
C2H2 Zn finger 327..347 CDD:275368 7/26 (27%)
zf-C2H2 356..377 CDD:278523 6/21 (29%)
C2H2 Zn finger 357..377 CDD:275368 6/20 (30%)
zf-H2C2_2 369..394 CDD:290200 8/32 (25%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
zf-H2C2_2 397..422 CDD:290200 9/25 (36%)
C2H2 Zn finger 413..433 CDD:275368 6/20 (30%)
zf-H2C2_2 426..449 CDD:290200 6/24 (25%)
zf-C2H2 439..461 CDD:278523 6/43 (14%)
C2H2 Zn finger 441..461 CDD:275368 6/41 (15%)
zf-C2H2 467..489 CDD:278523 7/22 (32%)
C2H2 Zn finger 469..489 CDD:275368 7/20 (35%)
C2H2 Zn finger 497..515 CDD:275368
row-1NP_001122473.1 GAT1 <15..288 CDD:227928 59/265 (22%)
C2H2 Zn finger 244..265 CDD:275368 8/25 (32%)
C2H2 Zn finger 275..295 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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