DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and znf408

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001315204.1 Gene:znf408 / 108004540 ZFINID:ZDB-GENE-130530-589 Length:764 Species:Danio rerio


Alignment Length:278 Identity:92/278 - (33%)
Similarity:142/278 - (51%) Gaps:32/278 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 YKCRICEKVFGCSETLQAHEKTHKSPR-YECADCGKGFSQLRNYKYHLSVHRGTKE-----FAAE 356
            :||..|:|.:|....|:.|:..|...: :.|..|||.|::..:.:.|..:|| |||     ...:
Zfish   378 FKCEQCDKSYGLKRDLKEHQVLHSGEKPFVCDICGKAFARRPSLRVHREIHR-TKEPDYQALKVK 441

  Fly   357 CPECGKTFNDKGYLSSHLKIHRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCNECGKRFS 421
            ||||.|...:.|.|.:|:::|...:.:.||:|.|.|.||.....|:|||||.||::|:.|..|||
Zfish   442 CPECDKELANSGSLRNHMRLHTGERPHICPHCNKCFRQRGNLQGHMRIHTGEKPYRCDHCDLRFS 506

  Fly   422 RKMLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHL 486
            :...|::|:.:|:|| .|.|.||||:..|...:..|.|||:|.:|:.|..|.|.:|....|:.||
Zfish   507 QVPELRRHLISHTGE-VYLCPVCGKALRDPHTLRAHERLHTGDRPYKCEQCGKGYTMATKLRRHL 570

  Fly   487 NYHTGCKPYVCPHPNCNQAFTQSSNMRTHAKKCQYRPLDGLTVTSSALPVPG-------KQQTGP 544
            ..|...|.:||  ..|...::...:::.|.:  .::|..|     .|||..|       |::..|
Zfish   571 KSHLEEKQHVC--QVCGAKYSMMQSLQRHLQ--LHQPDSG-----HALPTRGRPKRLGQKEEEEP 626

  Fly   545 PPT--------LAMAMAQ 554
            ..|        .|:|.||
Zfish   627 GRTESSGLEAGQAVACAQ 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 6/19 (32%)
COG5048 <316..502 CDD:227381 71/191 (37%)
C2H2 Zn finger 327..347 CDD:275368 6/19 (32%)
zf-C2H2 356..377 CDD:278523 8/20 (40%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
zf-H2C2_2 369..394 CDD:290200 8/24 (33%)
C2H2 Zn finger 385..405 CDD:275368 9/19 (47%)
zf-H2C2_2 397..422 CDD:290200 12/24 (50%)
C2H2 Zn finger 413..433 CDD:275368 7/19 (37%)
zf-H2C2_2 426..449 CDD:290200 11/22 (50%)
zf-C2H2 439..461 CDD:278523 9/21 (43%)
C2H2 Zn finger 441..461 CDD:275368 8/19 (42%)
zf-C2H2 467..489 CDD:278523 7/21 (33%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
C2H2 Zn finger 497..515 CDD:275368 2/17 (12%)
znf408NP_001315204.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24384
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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