DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15269 and LOC100909688

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_038959495.1 Gene:LOC100909688 / 100909688 RGDID:6502425 Length:541 Species:Rattus norvegicus


Alignment Length:397 Identity:125/397 - (31%)
Similarity:168/397 - (42%) Gaps:79/397 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 FFAPYVINGSVPPPPPLQQQQQP-LIRTKSTACTR-----PDCPEC---------LDYYQRLQTG 200
            |..||::..       |:|...| .:|.|::|...     ..|.||         |..:||:.||
  Rat    60 FSKPYLVTF-------LEQSSDPWRVRRKASAAIHLGSKAHKCKECGKAFDRNSVLIQHQRIHTG 117

  Fly   201 GYKQTAPLISPAASSVSSSTGSIRPVRDLIMSATGGAASTNISLTTVTNLSLNSVQATAVGMMP- 264
            .                      ||.:           .....:.......|:..|....|..| 
  Rat   118 E----------------------RPYK-----------CEECGMAFTVRCILSKHQRIHTGEKPY 149

  Fly   265 --KMTGGLITTAVGSNSGAIGGIGGYNATSAEEISYKCRICEKVFGCSETLQAHEKTHKSPR-YE 326
              |..|...:.:  ||      :..:.....||..|||..|.|.|.||..|..|::.|...: |:
  Rat   150 KCKECGKAFSCS--SN------LHQHQQIHREEKLYKCGECGKAFSCSSYLHRHQRIHTGMKPYK 206

  Fly   327 CADCGKGFSQLRNYKYHLSVHRGTKEFAAECPECGKTFNDKGYLSSHLKIHRNRKEYECPYCPKS 391
            |.:|||.|:...|..||..:|.|.|.:  :|.||||.|.......:|.:.|...|.|||..|.|:
  Rat   207 CKECGKAFNCSANLIYHQRIHTGEKPY--KCGECGKAFTIYSTFMNHQRTHSGEKPYECKDCGKA 269

  Fly   392 FNQRVAFNMHVRIHTGVKPHKCNECGKRFSRKMLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTL 456
            |........|.|||||.||:.|.||||.|:....||||.|.|:|||||:|.||||:|.....:..
  Rat   270 FTNCYNLIQHQRIHTGEKPYACEECGKSFNYSSHLKQHKRIHTGEKPYKCEVCGKAFNCSDYLVK 334

  Fly   457 HHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQAFTQSSNMRTHAK---- 517
            |.|:|:|.||:.|.:|.|||:...:|..|...|||.|.|.|  ..|.:|||..|.:..|.:    
  Rat   335 HQRIHTGEKPYKCEVCGKAFSFSTYLHKHQRIHTGEKRYRC--EECGRAFTNYSGLIVHRRVHTG 397

  Fly   518 ----KCQ 520
                ||:
  Rat   398 EKPYKCE 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 8/19 (42%)
COG5048 <316..502 CDD:227381 79/186 (42%)
C2H2 Zn finger 327..347 CDD:275368 8/19 (42%)
zf-C2H2 356..377 CDD:278523 7/20 (35%)
C2H2 Zn finger 357..377 CDD:275368 7/19 (37%)
zf-H2C2_2 369..394 CDD:290200 9/24 (38%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
zf-H2C2_2 397..422 CDD:290200 14/24 (58%)
C2H2 Zn finger 413..433 CDD:275368 11/19 (58%)
zf-H2C2_2 426..449 CDD:290200 16/22 (73%)
zf-C2H2 439..461 CDD:278523 9/21 (43%)
C2H2 Zn finger 441..461 CDD:275368 8/19 (42%)
zf-C2H2 467..489 CDD:278523 7/21 (33%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
C2H2 Zn finger 497..515 CDD:275368 6/17 (35%)
LOC100909688XP_038959495.1 KRAB 17..76 CDD:214630 5/22 (23%)
C2H2 Zn finger 95..115 CDD:275368 6/19 (32%)
COG5048 119..540 CDD:227381 108/309 (35%)
C2H2 Zn finger 123..143 CDD:275368 2/19 (11%)
C2H2 Zn finger 151..171 CDD:275368 4/27 (15%)
C2H2 Zn finger 179..199 CDD:275368 8/19 (42%)
C2H2 Zn finger 207..227 CDD:275368 8/19 (42%)
C2H2 Zn finger 235..255 CDD:275368 7/19 (37%)
C2H2 Zn finger 263..283 CDD:275368 6/19 (32%)
C2H2 Zn finger 291..311 CDD:275368 11/19 (58%)
C2H2 Zn finger 319..339 CDD:275368 8/19 (42%)
C2H2 Zn finger 347..367 CDD:275368 7/19 (37%)
C2H2 Zn finger 375..395 CDD:275368 7/21 (33%)
C2H2 Zn finger 403..423 CDD:275368 1/2 (50%)
C2H2 Zn finger 431..451 CDD:275368
C2H2 Zn finger 459..479 CDD:275368
C2H2 Zn finger 487..507 CDD:275368
C2H2 Zn finger 515..535 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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