DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15269 and Zfp717

DIOPT Version :9

Sequence 1:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_008764233.1 Gene:Zfp717 / 100361503 RGDID:2319964 Length:461 Species:Rattus norvegicus


Alignment Length:388 Identity:126/388 - (32%)
Similarity:174/388 - (44%) Gaps:72/388 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 IRPVRDLIMSATGGAASTNISLTTVTNLSLNSVQATAVGMMPKMTGGLITTAVGSNSGAIGGIGG 287
            ::|  :||::...|....:.:.|:|.|||         |:  .....|:.|...::|.....|..
  Rat    48 VKP--ELILNLEQGLGPVSTAGTSVWNLS---------GI--DKGNSLVDTIQENDSRHFWQIEI 99

  Fly   288 YNATSAEEI----------------SYKCRICEKVFGCSETLQAHEKTH--KSPRYECADCGKGF 334
            .:.||.||:                ||:|.:|.:.|.........::.|  ::| |.|......|
  Rat   100 NSRTSNEELVEAELKIHEEIHQGTKSYECEVCLEAFYLKPQYSTDQRYHTCENP-YNCKKFRGAF 163

  Fly   335 SQLRNYKYHLSVHRGTKEFAAECPECGKTFNDKGYLSSHLKIHRNRKEYECPYCPKSFNQRVAFN 399
            .....::....:.||.|..|  |.||||:|..|.:|:.|.:.|...|.|||..|.|:|..|...|
  Rat   164 YSKSTFRPCQRLERGEKPHA--CIECGKSFYCKSHLTVHQRTHTGEKPYECNDCKKAFYSRSQLN 226

  Fly   400 MHVRIHTGVKPHKCNECGKRFSRKMLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGI 464
            :|:|.|||.||::|.||.|.|.|...|..|.|||:|||||:|.||.|:|...|.:|:|||.|:|.
  Rat   227 VHLRTHTGEKPYECKECRKTFYRNSDLTVHQRTHTGEKPYECKVCSKAFYCNSQLTVHHRTHTGE 291

  Fly   465 KPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQAFTQSS----NMRTH---------- 515
            ||:.|.:|.|||..|..|..|...|||.|||.|  ..|.:||...|    ::|||          
  Rat   292 KPYECQVCNKAFYCKSQLAVHHRTHTGEKPYQC--QECRKAFQCRSDLTRHLRTHTGERPYGCTE 354

  Fly   516 AKKCQYRPLDGLTV---------------------TSSALPVPGKQQTGPPPTLAMAMAQTFQ 557
            .:|..||..| |||                     .:|.|.|..:|.||..|.......:.||
  Rat   355 CRKAFYRKSD-LTVHQRTHTGEKPYECKECRKAFYCNSQLTVHQRQHTGEKPYECKDCGKAFQ 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 3/19 (16%)
COG5048 <316..502 CDD:227381 80/187 (43%)
C2H2 Zn finger 327..347 CDD:275368 2/19 (11%)
zf-C2H2 356..377 CDD:278523 9/20 (45%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
zf-H2C2_2 369..394 CDD:290200 10/24 (42%)
C2H2 Zn finger 385..405 CDD:275368 8/19 (42%)
zf-H2C2_2 397..422 CDD:290200 13/24 (54%)
C2H2 Zn finger 413..433 CDD:275368 9/19 (47%)
zf-H2C2_2 426..449 CDD:290200 14/22 (64%)
zf-C2H2 439..461 CDD:278523 11/21 (52%)
C2H2 Zn finger 441..461 CDD:275368 10/19 (53%)
zf-C2H2 467..489 CDD:278523 8/21 (38%)
C2H2 Zn finger 469..489 CDD:275368 8/19 (42%)
C2H2 Zn finger 497..515 CDD:275368 6/21 (29%)
Zfp717XP_008764233.1 KRAB 4..59 CDD:214630 3/12 (25%)
C2H2 Zn finger 184..204 CDD:275368 9/19 (47%)
COG5048 <194..391 CDD:227381 79/199 (40%)
C2H2 Zn finger 212..232 CDD:275368 8/19 (42%)
C2H2 Zn finger 240..260 CDD:275368 9/19 (47%)
C2H2 Zn finger 268..288 CDD:275368 10/19 (53%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
C2H2 Zn finger 324..344 CDD:275368 6/21 (29%)
C2H2 Zn finger 352..372 CDD:275368 7/20 (35%)
C2H2 Zn finger 380..400 CDD:275368 3/19 (16%)
zf-H2C2_2 393..415 CDD:404364 6/21 (29%)
C2H2 Zn finger 408..428 CDD:275368 2/9 (22%)
zf-H2C2_2 420..445 CDD:404364
C2H2 Zn finger 436..456 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.