DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vig and FDY

DIOPT Version :9

Sequence 1:NP_523572.1 Gene:vig / 34885 FlyBaseID:FBgn0024183 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001303579.2 Gene:FDY / 8674077 FlyBaseID:FBgn0265047 Length:403 Species:Drosophila melanogaster


Alignment Length:508 Identity:210/508 - (41%)
Similarity:263/508 - (51%) Gaps:126/508 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSAGKNRYELLFMDDDVSDPLDNLVAPTAAAAAAAAGKKKQPSAAAAAATKTTANKVANSNNKA 65
            ||::|.|||||||||||.|..|:.    ...||..||.||.:|:.|                   
  Fly     1 MDNSGNNRYELLFMDDDDSSGLEQ----PQIAAVVAAPKKPEPAKA------------------- 42

  Fly    66 NAGSNIGGPNAKKPNQAEKENKPNNALNKTDGKKFTPSADNKQQQFNNNASSNYKQQGAPRQGGG 130
                    |...| :::||||||..|..|.:    ||.|.|                .:|.:|  
  Fly    43 --------PKVPK-SKSEKENKPVVAGRKAN----TPVAKN----------------ASPVKG-- 76

  Fly   131 ANRTREFGSGQGQGQGQGGQQQRSVNFRQQNGNAETREQRNNRRNVRENVGAPDGQQSRPYRGPG 195
                       |:|.. ||...|..|......|.:.|...|.|...:|::|.             
  Fly    77 -----------GKGPA-GGDVGRPKNPTANGANNQGRFNNNQRYGNKESIGE------------- 116

  Fly   196 GGPGAGGDRPQRQ--NRNYDGQNR--------KREFDRQSGSDRTGVKSIDKRDGAGSHNWGSVK 250
                .|.:.||||  ||:..|..|        |||||||||||:|||||||||:|.|:|||||.|
  Fly   117 ----FGNELPQRQFNNRDNRGPPRVRSGEKFGKREFDRQSGSDKTGVKSIDKREGVGAHNWGSPK 177

  Fly   251 EAIDDVNKNESETNVTNAEGGAKADESGTEPQNEQATAEEEAKELTLDEWKAQQGQRIKPTFNIR 315
            :.|:|: |...||: ..||....|:|...:|  ..|..|:|:|::|||||||.:.||.||.:|:|
  Fly   178 QDIEDL-KTTGETS-PQAEKKDSANEQSADP--AVAAEEDESKQMTLDEWKALRDQRAKPNYNLR 238

  Fly   316 KAGEG-EDTTQWKKMVVLTSNKKKENDSEEELEYDPALYPQRVGRQQRVLDIQFNFNDGRRGGPG 379
            ||||| .|..:||||:||  :||||::||:||||||:||||||||.||::||||||||||:   |
  Fly   239 KAGEGAADNAEWKKMIVL--SKKKESNSEDELEYDPSLYPQRVGRLQRIVDIQFNFNDGRK---G 298

  Fly   380 GF--GGRGGRGGPRPGGF-GGGPRSEGGNRDGGNREGGRDNREGG--NRGPRDGQQHNNEGGGSS 439
            ||  |.|.| .||..||| ..|||.|||.|:.|.|      .|||  |.||| |:.:.|:  |..
  Fly   299 GFRKGTRRG-AGPCEGGFRNDGPRGEGGYRNDGPR------GEGGYRNEGPR-GEGYRND--GPR 353

  Fly   440 AQNQRPPIDRRGPGNNQNNNQNSGPGPNKRFERQQNTAP---KVNDERQFPTL 489
            .|..|.|.....|.|...|.|:     |.||..::.:|.   ||:||.|||||
  Fly   354 EQGFRGPRFNNAPSNGYENRQD-----NNRFGEKRRSAEKPLKVDDEAQFPTL 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vigNP_523572.1 HABP4_PAI-RBP1 217..319 CDD:282609 58/109 (53%)
FDYNP_001303579.2 HABP4_PAI-RBP1 144..242 CDD:335891 57/101 (56%)
PRK11634 <308..368 CDD:236941 28/68 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I4255
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H136326
Inparanoid 1 1.050 101 1.000 Inparanoid score I2167
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002116
OrthoInspector 1 1.000 - - mtm6592
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12299
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1570
88.060

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