DRSC/TRiP Functional Genomics Resources

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Protein Alignment vig and vig-1

DIOPT Version :10

Sequence 1:NP_523572.1 Gene:vig / 34885 FlyBaseID:FBgn0024183 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001367502.1 Gene:vig-1 / 173512 WormBaseID:WBGene00006924 Length:378 Species:Caenorhabditis elegans


Alignment Length:442 Identity:150/442 - (33%)
Similarity:188/442 - (42%) Gaps:121/442 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NRYELLFMDDDVSDPLDNLVAPTAAAAAAAAGKKKQ-----------PSAAAAAATKTTANKVAN 60
            |::.|...|||..|....|:...:..||    |||:           |:||..|||||..   |.
 Worm    11 NKFGLPSDDDDEYDDPRELIQKVSQIAA----KKKEEKSVKPAQPVKPAAAPVAATKTDG---AA 68

  Fly    61 SNNKANAGSNIGGPNAKKPNQAEKENKPNNALNKTDGKKFTPSADNKQQQFNNNASSNYKQQGAP 125
            ...:...|...||  |.:|...|:.:..|       |.:  |..:|:              :|.|
 Worm    69 GRGRGGRGRGRGG--AGRPRDGERVSNEN-------GDR--PQGENR--------------RGGP 108

  Fly   126 RQGGGANRTREFGSGQGQGQGQGGQQQRSVNFRQQNGNAETREQRNNRRNVRENVGAPDGQQSRP 190
            |:||.....|..|.|     |:||       |.::|...|..:|         .|...|||.:|.
 Worm   109 RRGGERGAARPAGRG-----GRGG-------FTRENREGEEPKQ---------EVSFEDGQDTRA 152

  Fly   191 YRGP-----GGGP--GAGGDRPQRQNRNYDGQNRKREFDRQSGSDRTGVKSIDKRDGAGSHNWGS 248
            .|..     ||||  |.||.|          ..|.|:||||||||||||:|.||:||.|..|||.
 Worm   153 PRRRGGFTLGGGPSGGRGGGR----------GGRGRQFDRQSGSDRTGVRSFDKKDGHGKGNWGD 207

  Fly   249 VKEAIDDVNKNESETNVTNAEGGAKADESGTEPQ-NEQATAEE---------EAKELTLDEWKAQ 303
            .|:.:      ..||.....||.     ..|||: ..:.||||         .||:.||.|:|| 
 Worm   208 QKDEL------AGETENIAPEGA-----ESTEPEVPREKTAEELAYEAELAVLAKQKTLKEFKA- 260

  Fly   304 QGQRIKPTFNIRKAGEGEDTTQWKKMVVLTSNKKKE--NDSEEELEYDPALYPQRVGRQQRVLDI 366
            ..:...|.||.||||||...| :.|:|.:    |||  .|.||    |..:...:..|:| ||||
 Worm   261 AAKADAPKFNTRKAGEGAADT-FGKLVPI----KKEVIPDREE----DEVVVIHKAPRKQ-VLDI 315

  Fly   367 QFNF-NDGRRGGPGGFGGRGGRGGPRPGGFGGGPRSEGGNRDGGNREGGRDN 417
            ...| ||...........|..|||||.||.|||   .||.|.||:  |||:|
 Worm   316 SITFRNDRPERERNDRSERPQRGGPRGGGRGGG---RGGQRQGGH--GGRNN 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vigNP_523572.1 HABP4_PAI-RBP1 218..319 CDD:461421 47/110 (43%)
vig-1NP_001367502.1 HABP4_PAI-RBP1 179..276 CDD:461421 46/108 (43%)

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