Protein Alignment TfIIS and RPA12

DIOPT Version :9

• Sequence 1: NP_001260457.1
• Gene: TfIIS / 34883
• FlyBaseID: FBgn0010422
• Length: 313
• Species: Drosophila melanogaster
• Sequence 2: NP_012597.1
• Gene: RPA12 / 853526
• SGDID: S000003824
• Length: 125
• Species: Saccharomyces cerevisiae
• Alignment Length: 113
• Identity: 33/113 - (29%)
• Similarity: 49/113 - (43%)
• Gaps: 18/113 - (15%)

  Fly   210 LKDPKNPGLRGNFMCGAVTA----KQLAKMTPEEMASDEM--KKLREK--FVKEAINDAQL---A 263
            |::| |..|..|..|....|    .|.:.:......:|:.  ..||.|  .||.::...:|   |
Yeast    17 LENP-NAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSLRAKKSVVKTSLKKNELKDGA 80

  Fly   264 TVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 311
            |::.      ||.:|......|:.||.|||||..|.|..|..||.:::
Yeast    81 TIKE------KCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFR 122

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TfIIS	NP_001260457.1	TFSII	5..313	CDD:273592	33/113 (29%)
		TFS2N	7..82	CDD:197766
		TFIIS_M	151..257	CDD:284835	14/54 (26%)
		Zn-ribbon_TFIIS	266..312	CDD:259796	16/46 (35%)
RPA12	NP_012597.1	RPB9	6..124	CDD:224510	33/113 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1594
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810