DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TfIIS and DST1

DIOPT Version :9

Sequence 1:NP_001260457.1 Gene:TfIIS / 34883 FlyBaseID:FBgn0010422 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_011472.1 Gene:DST1 / 852839 SGDID:S000003011 Length:309 Species:Saccharomyces cerevisiae


Alignment Length:322 Identity:95/322 - (29%)
Similarity:155/322 - (48%) Gaps:31/322 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EEVFRIQKKMSKMASDGTGQDQALDLLKALQTLNINLD-ILTKTRIGMTVNELRKSSKDDEVIAL 68
            :||....|.:.|..|:...   .|::|..|....:..: :|.:|::|:.||:.:||: :.|:..|
Yeast     4 KEVLVHVKNLEKNKSNDAA---VLEILHVLDKEFVPTEKLLRETKVGVEVNKFKKST-NVEISKL 64

  Fly    69 AKTLIKNWKRFLASPAPTTPNNSSAKEGSSNNSSASKSTSAAKSS--SSISGKDKSSSSSSSKDK 131
            .|.:|.:||       .....|..:::...::...:...:..|::  .|::|..:.:||.|...|
Yeast    65 VKKMISSWK-------DAINKNKRSRQAQQHHQDHAPGNAEDKTTVGESVNGVQQPASSQSDAMK 122

  Fly   132 EKKGSTSSSQTSFPSGGMTDAVRIKCREMLATAL-----KIGEVPEGCGEPEEMAAELEDAIYSE 191
            :.|..::..:.|...|..|.....|.|:.:..||     |..|      .|.:.......||.||
Yeast   123 QDKYVSTKPRNSKNDGVDTAIYHHKLRDQVLKALYDVLAKESE------HPPQSILHTAKAIESE 181

  Fly   192 F---NNTDMK---YKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLRE 250
            .   ||.|..   ||.|.|...:|:....||.|:.....|.:|.:.||....:::|...:|:..|
Yeast   182 MNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIE 246

  Fly   251 KFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKF 312
            :..|:.:.:||.||::.:.||...|.|||::..:|.||||||||||:|||..|..|||||||
Yeast   247 EIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIISNP_001260457.1 TFSII 5..313 CDD:273592 95/322 (30%)
TFS2N 7..82 CDD:197766 20/75 (27%)
TFIIS_M 151..257 CDD:284835 30/116 (26%)
Zn-ribbon_TFIIS 266..312 CDD:259796 26/45 (58%)
DST1NP_011472.1 TFSII 3..309 CDD:273592 95/322 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I2472
eggNOG 1 0.900 - - E1_COG1594
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1263
Isobase 1 0.950 - 0 Normalized mean entropy S1233
OMA 1 1.010 - - QHG53988
OrthoFinder 1 1.000 - - FOG0001112
OrthoInspector 1 1.000 - - otm46625
orthoMCL 1 0.900 - - OOG6_101177
Panther 1 1.100 - - O PTHR11477
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2312
SonicParanoid 1 1.000 - - X770
TreeFam 1 0.960 - -
1413.810

Return to query results.
Submit another query.