Protein Alignment TfIIS and RPC11

DIOPT Version :9

• Sequence 1: NP_001260457.1
• Gene: TfIIS / 34883
• FlyBaseID: FBgn0010422
• Length: 313
• Species: Drosophila melanogaster
• Sequence 2: NP_010330.1
• Gene: RPC11 / 851615
• SGDID: S000002452
• Length: 110
• Species: Saccharomyces cerevisiae
• Alignment Length: 68
• Identity: 29/68 - (42%)
• Similarity: 35/68 - (51%)
• Gaps: 1/68 - (1%)

  Fly   244 EMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGN 308
            :.|||..|.|.:.:... ...|..|||.......|...:..:.|||.||||||||||..|..||:
Yeast    42 DRKKLPRKEVDDVLGGG-WDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVNCGH 105

  Fly   309 RWK 311
            |||
Yeast   106 RWK 108

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TfIIS	NP_001260457.1	TFSII	5..313	CDD:273592	29/68 (43%)
		TFS2N	7..82	CDD:197766
		TFIIS_M	151..257	CDD:284835	5/12 (42%)
		Zn-ribbon_TFIIS	266..312	CDD:259796	23/46 (50%)
RPC11	NP_010330.1	RPB9	1..110	CDD:224510	29/68 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1594
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810