Protein Alignment TfIIS and Polr2i

DIOPT Version :9

• Sequence 1: NP_001260457.1
• Gene: TfIIS / 34883
• FlyBaseID: FBgn0010422
• Length: 313
• Species: Drosophila melanogaster
• Sequence 2: NP_081535.1
• Gene: Polr2i / 69920
• MGIID: 1917170
• Length: 125
• Species: Mus musculus
• Alignment Length: 79
• Identity: 19/79 - (24%)
• Similarity: 35/79 - (44%)
• Gaps: 14/79 - (17%)

  Fly   234 KMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMT 298
            |:|.|   .||:.::    :.:...|..|     .:|:...|.||..:...:.|..:..|::.|.
Mouse    57 KITHE---VDELTQI----IADVSQDPTL-----PRTEDHPCQKCGHKEAVFFQSHSARAEDAMR 109

  Fly   299 TFVMCN--ECGNRW 310
            .:.:|.  .||:||
Mouse   110 LYYVCTAPHCGHRW 123

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TfIIS	NP_001260457.1	TFSII	5..313	CDD:273592	19/79 (24%)
		TFS2N	7..82	CDD:197766
		TFIIS_M	151..257	CDD:284835	5/22 (23%)
		Zn-ribbon_TFIIS	266..312	CDD:259796	12/47 (26%)
Polr2i	NP_081535.1	RPB9	14..125	CDD:224510	19/79 (24%)
		Zn-ribbon_RPB9	74..124	CDD:259793	14/55 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1594
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810