DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIS and TCEA3

DIOPT Version :9

Sequence 1:NP_001260457.1 Gene:TfIIS / 34883 FlyBaseID:FBgn0010422 Length:313 Species:Drosophila melanogaster
Sequence 2:XP_016857689.1 Gene:TCEA3 / 6920 HGNCID:11615 Length:487 Species:Homo sapiens


Alignment Length:347 Identity:160/347 - (46%)
Similarity:213/347 - (61%) Gaps:37/347 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVEEEVFRIQKKMSKMASDGTGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDEV 65
            |..|||:.||.||:.||.: ....:.||||||.|.:..:::.:|..||||:.||.:||...|.||
Human     1 MGQEEELLRIAKKLEKMVA-RKNTEGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64

  Fly    66 IALAKTLIKNWKRFLASPAPTTPNNSSAKEGSS------------------------NNSSASKS 106
            ::|||.|||||||.|.||.|........:|.:.                        .:....:.
Human    65 VSLAKVLIKNWKRLLDSPGPPKGEKGEEREKAKKKEKGLECSDWKPEAGLSPPRKKREDPKTRRD 129

  Fly   107 TSAAKSSSSISGKDKS---SSSSSSKDKEKKGSTSSSQTSFPSGGMT--------DAVRIKCREM 160
            :..:|||:|.|.|..|   |:||.||.:..|..:|....:|.|....        |:||.||.||
Human   130 SVDSKSSASSSPKRPSVERSNSSKSKAESPKTPSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEM 194

  Fly   161 LATALKIGEVPEGCG-EPEEMAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMC 224
            |:.|||..:..:..| ..::||:|:||.||.|..:|||||:||:|||::|||||:|||||.|.:.
Human   195 LSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLS 259

  Fly   225 GAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQ 289
            ||::|..:||||.|||||||:::||....:|||.:.|:|...||.|||.:|:||||:||||||:|
Human   260 GAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQ 324

  Fly   290 TRSADEPMTTFVMCNECGNRWK 311
            ||||||||||||:|||||||||
Human   325 TRSADEPMTTFVLCNECGNRWK 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIISNP_001260457.1 TFSII 5..313 CDD:273592 158/343 (46%)
TFS2N 7..82 CDD:197766 36/74 (49%)
TFIIS_M 151..257 CDD:284835 58/106 (55%)
Zn-ribbon_TFIIS 266..312 CDD:259796 38/46 (83%)
TCEA3XP_016857689.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5307
eggNOG 1 0.900 - - E1_COG1594
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20684
Inparanoid 1 1.050 300 1.000 Inparanoid score I2700
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1579101at2759
OrthoFinder 1 1.000 - - FOG0001112
OrthoInspector 1 1.000 - - otm41267
orthoMCL 1 0.900 - - OOG6_101177
Panther 1 1.100 - - O PTHR11477
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2312
SonicParanoid 1 1.000 - - X770
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.860

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