DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIS and CG33785

DIOPT Version :9

Sequence 1:NP_001260457.1 Gene:TfIIS / 34883 FlyBaseID:FBgn0010422 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001027443.1 Gene:CG33785 / 3772344 FlyBaseID:FBgn0061362 Length:108 Species:Drosophila melanogaster


Alignment Length:92 Identity:28/92 - (30%)
Similarity:47/92 - (51%) Gaps:9/92 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 FMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYN 286
            |.|.  |...::|:. .::::....:|:|   .:.:...:.|......|| .:|..|..:...:.
  Fly    23 FTCN--TCPYISKIR-RKISTKTFPRLKE---VDHVLGGKAAWENVDSTD-AECPTCGHKRAYFM 80

  Fly   287 QLQTRSADEPMTTFVMC--NECGNRWK 311
            |:||||||||||||..|  :||.:.|:
  Fly    81 QIQTRSADEPMTTFYKCCNHECNHTWR 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIISNP_001260457.1 TFSII 5..313 CDD:273592 28/92 (30%)
TFS2N 7..82 CDD:197766
TFIIS_M 151..257 CDD:284835 6/34 (18%)
Zn-ribbon_TFIIS 266..312 CDD:259796 21/48 (44%)
CG33785NP_001027443.1 RPB9 1..108 CDD:224510 28/92 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1594
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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