DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIS and Tcea2

DIOPT Version :9

Sequence 1:NP_001260457.1 Gene:TfIIS / 34883 FlyBaseID:FBgn0010422 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_033352.1 Gene:Tcea2 / 21400 MGIID:107368 Length:299 Species:Mus musculus


Alignment Length:320 Identity:156/320 - (48%)
Similarity:210/320 - (65%) Gaps:28/320 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVEEEVFRIQKKMSKMASDGTGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDEV 65
            |..|||:.||.:::.||.:....:. |:|||:.|:.:.|.|.:|..||:||:||.|||.|.|:|:
Mouse     1 MGKEEEIARIARRLDKMVTRKNAEG-AMDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEEL 64

  Fly    66 IALAKTLIKNWKRFLASPAPTTPNNSSAKEGSSNNSSASKSTSAAKSSSSISGKDKSSSSSSSKD 130
            |||||:|||:||:.|           ...:|.|.|.  .:.|....|||    ||.|.::..|..
Mouse    65 IALAKSLIKSWKKLL-----------DVSDGKSRNQ--GRGTPLPTSSS----KDASRTTDLSCK 112

  Fly   131 KEKKGSTSSSQ--TSFPSGGMT-DAVRIKCREMLATALKIGE----VPEGCGEPEEMAAELEDAI 188
            |.....|.|:.  |:||...:| ||||.||||||..||:...    |...|   |.:::::|:.|
Mouse   113 KPDPPRTPSTPRITTFPQVPITCDAVRNKCREMLTLALQTDHDHVAVGVNC---EHLSSQIEECI 174

  Fly   189 YSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFV 253
            :.:..|||||||||:|||::||||.||||||.|.:|||:|.:|:|.||.|||||||:|::|:...
Mouse   175 FLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMT 239

  Fly   254 KEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313
            ||||.:.|:|...||:|||..|.||:|:||||.|:||||:||||||:|:|||||||||||
Mouse   240 KEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRWKFC 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIISNP_001260457.1 TFSII 5..313 CDD:273592 152/314 (48%)
TFS2N 7..82 CDD:197766 35/74 (47%)
TFIIS_M 151..257 CDD:284835 59/109 (54%)
Zn-ribbon_TFIIS 266..312 CDD:259796 33/45 (73%)
Tcea2NP_033352.1 TFIIS_I 4..80 CDD:238107 38/87 (44%)
TFSII 5..299 CDD:273592 152/314 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 82..127 14/50 (28%)
DUF4584 87..>148 CDD:291876 26/66 (39%)
TFIIS_M 136..243 CDD:284835 59/109 (54%)
Zn-ribbon_TFIIS 252..298 CDD:259796 33/45 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5287
eggNOG 1 0.900 - - E1_COG1594
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 305 1.000 Inparanoid score I2612
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53988
OrthoDB 1 1.010 - - D1579101at2759
OrthoFinder 1 1.000 - - FOG0001112
OrthoInspector 1 1.000 - - otm43325
orthoMCL 1 0.900 - - OOG6_101177
Panther 1 1.100 - - O PTHR11477
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2312
SonicParanoid 1 1.000 - - X770
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.870

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