Protein Alignment TfIIS and rpoa-12

DIOPT Version :10

• Sequence 1: NP_476967.1
• Gene: TfIIS / 34883
• FlyBaseID: FBgn0010422
• Length: 313
• Species: Drosophila melanogaster
• Sequence 2: NP_506572.1
• Gene: rpoa-12 / 182648
• WormBaseID: WBGene00007616
• Length: 119
• Species: Caenorhabditis elegans
• Alignment Length: 98
• Identity: 27/98 - (27%)
• Similarity: 42/98 - (42%)
• Gaps: 17/98 - (17%)

  Fly   224 CGAVTAKQLAKMTPEEMASD------EMKKLREKFVK--EAINDAQLATVQGTKTDLLK------ 274
            |||:.  :|....|..::..      .:|:..::.|.  |.|.:..:|...|.:.|...
 Worm    16 CGAIL--ELPAQAPATVSCKVCSTRWAVKERVDQVVSRVEKIYERTVADTDGIENDESADAVVDH 78

  Fly   275 -CAKCKKRNCTYNQLQTRSADEPMTTFVMCNEC 306
             |.||.....:|:.:|||||||..|.|..|.:|
 Worm    79 ICTKCGHSKASYSTMQTRSADEGQTVFYTCLKC 111

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TfIIS	NP_476967.1	TFSII	5..313	CDD:273592	27/98 (28%)
rpoa-12	NP_506572.1	RPB9	12..118	CDD:441202	27/98 (28%)
		Zn-ribbon_RPA12	74..117	CDD:259792	15/38 (39%)