DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIS and TfIIS

DIOPT Version :10

Sequence 1:NP_476967.1 Gene:TfIIS / 34883 FlyBaseID:FBgn0010422 Length:313 Species:Drosophila melanogaster
Sequence 2:XP_061516042.1 Gene:TfIIS / 1279994 VectorBaseID:AGAMI1_002375 Length:339 Species:Anopheles gambiae


Alignment Length:344 Identity:229/344 - (66%)
Similarity:268/344 - (77%) Gaps:36/344 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVEEEVFRIQKKMSKMA--SDGTGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDD 63
            |:|||||||||||:.||.  |||:||:||||||:.||.|||:||||||||||||||||||.||||
Mosquito     1 MNVEEEVFRIQKKLGKMTSLSDGSGQEQALDLLRELQRLNIDLDILTKTRIGMTVNELRKCSKDD 65

  Fly    64 EVIALAKTLIKNWKRFLASPAPTTPNNSSAKEGSSNNSSASKSTSAAKSSSSI----------SG 118
            |||:|||:|||:||||||.   |.|:...:|:.|.::|.|| |.|::|||.|.          :|
Mosquito    66 EVISLAKSLIKSWKRFLAG---TPPSKDGSKDASKSSSKAS-SKSSSKSSDSANAGSGGAGGGTG 126

  Fly   119 KDKSSSSS-----------SSKDKEKKGSTSSSQTSFPSGGM-------TDAVRIKCREMLATAL 165
            .||::|.|           :.||.|::..:|.|:.. ||.||       |||||:|||||||.||
Mosquito   127 GDKANSGSGGAGGGGTGGGNKKDYEREKESSKSKAP-PSSGMSSQSSNTTDAVRLKCREMLANAL 190

  Fly   166 KI-GEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTA 229
            :: ||.||||..|||:..|||:||:.||.||||:||||:|||||||||||||.||.||:.||:||
Mosquito   191 RVDGEPPEGCQTPEELGEELEEAIFVEFKNTDMRYKNRVRSRVANLKDPKNPSLRANFVSGAITA 255

  Fly   230 KQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSAD 294
            ::|||||.|||||||||.||::||||||||||||||||||||||||.||||||||||||||||||
Mosquito   256 QRLAKMTSEEMASDEMKHLRDRFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSAD 320

  Fly   295 EPMTTFVMCNECGNRWKFC 313
            |||||||||||||:|||||
Mosquito   321 EPMTTFVMCNECGHRWKFC 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIISNP_476967.1 TFSII 5..313 CDD:273592 224/338 (66%)
TfIISXP_061516042.1 None

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