DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ck and XIA

DIOPT Version :10

Sequence 1:NP_523571.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:NP_171954.1 Gene:XIA / 839480 AraportID:AT1G04600 Length:1730 Species:Arabidopsis thaliana


Alignment Length:2051 Identity:553/2051 - (26%)
Similarity:850/2051 - (41%) Gaps:481/2051 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VTRGDYIW------------IEPASGREFDVAIGARVVSAEGRRIQVRDDDGDEVWLAPERRIKA 56
            ||.|.::|            :|..:..|..|....:.|.|:...:..:|.:..|:          
plant     7 VTVGSHVWVEDPDDAWIDGEVEEVNSEEITVNCSGKTVVAKLNNVYPKDPEFPEL---------- 61

  Fly    57 MHASSVQGVEDMISLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILP-IYTGDQIKLY 120
                   ||:||..|..|||.|:|.||..||..|.||||||:||:||||::.|| :|..:.:|.|
plant    62 -------GVDDMTKLAYLHEPGVLLNLKCRYNANEIYTYTGNILIAVNPFKRLPHLYGSETMKQY 119

  Fly   121 KERKIGELPPHIFAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAISGKHS---- 181
            |....|||.||.||:.|:||..|......|.|::|||||||||||||:::||||.:.|:..    
plant   120 KGTAFGELSPHPFAVADSAYRKMINEGVSQAILVSGESGAGKTESTKMLMQYLAYMGGRAESEGR 184

  Fly   182 WIEQQILEANPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHS 246
            .:|||:||:||:|||||||||:||:|||||||:::|.|...|.|.||.|..||||:||:...:..
plant   185 SVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDP 249

  Fly   247 ERNYHVFYCILAGLSADEKSRLDLGMAADYKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLFSDQ 311
            |||||.|| :|......|..|..||..:.::||...|....:|.||:.|:...|.||.|:..:.:
plant   250 ERNYHCFY-MLCAAPEQETERYKLGKPSTFRYLNQSNCYALDGLDDSKEYLATRKAMDVVGINSE 313

  Fly   312 EIWEIIKLLAALLHCGNIKYKATVVDNLDATEIPE-----HINVERVAGLLGLPIQPLIDALTRR 371
            |...|.:::||:||.|||::...  :..:|:|..:     |:.|  .|.|.....:.|.|:|.:|
plant   314 EQDGIFRVVAAILHLGNIEFAKG--EESEASEPKDEKSRFHLKV--AAELFMCDGKALEDSLCKR 374

  Fly   372 TLFAHGETVVSTLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTAIFKPRGTSRNAIGVLDIFGFE 436
            .:....|::..:|..|.:...|||..|.:|.::|..:|.|||.:|.:. ..|::.||||||:|||
plant   375 VMVTRDESITKSLDPDSAALGRDALAKIVYSKLFDWLVTKINNSIGQD-PNSKHIIGVLDIYGFE 438

  Fly   437 NFDQNSFEQFCINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQDALDLIAIKQLNIM 501
            :|..|||||||||..||.|||.|.||:||:|||||..|.|:|.:|||:||||.||||..|...|:
plant   439 SFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGII 503

  Fly   502 ALIDEEARFPKGTDQTMLAKLHKTHGSHKNYLKPKSDINTSFGLNHFAGVVFYDTRGFLDKNRDT 566
            ||:||...||:.|..|...||::|..:||.:.|||. ..|.|.:.|:||.|.|.|..|||||:|.
plant   504 ALLDEACMFPRSTHDTFAQKLYQTFKNHKRFGKPKL-AQTDFTICHYAGDVTYQTELFLDKNKDY 567

  Fly   567 FSPDLLHLVSQSTNKFLRQIFAQDIEMGAETRKRTPTLSTQFRKSLDALMKTLSSCQPFFIRCIK 631
            ...:...|:|.|...|:..:|....|..::|.|.: ::.:||::.|.:|:::||:.:|.:|||:|
plant   568 VVGEHQALLSSSDCSFVSSLFPPLPEESSKTSKFS-SIGSQFKQQLQSLLESLSTTEPHYIRCVK 631

  Fly   632 PNELKKPMMFDRGLCCRQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLIPGVPPAHRTDCQA 696
            ||.|.||.:|:......|||..|:||.|||..||||.|..|.||:.|:|.|.|....:...:..|
plant   632 PNNLLKPDIFENINILHQLRCGGVMEAIRISCAGYPTRKPFNEFLTRFRILAPETTKSSYDEVDA 696

  Fly   697 ATSRICAVVLGKSD---YQLGHTKVFLKDAHDLFLEQERDRVLTRKILILQRSIRGWVYRRRFLR 758
                 |..:|.|.|   :|:|.|||||:......::..|..||.....|:||::..:..|::||.
plant   697 -----CKKLLAKVDLKGFQIGKTKVFLRAGQMAEMDAHRAEVLGHSARIIQRNVLTYQSRKKFLL 756

  Fly   759 LRAAAITVQRFWKGYAQRKRYRNMR--VGYMRLQALIRSRVLSHRFRHLRGHIVGLQAHARGYLV 821
            |:||:..:|...:|...|..:..||  ...:|:|...|:.:..:.::.|......:|...|....
plant   757 LQAASTEIQALCRGQVARVWFETMRREAASLRIQKQARTYICQNAYKTLCSSACSIQTGMRAKAA 821

  Fly   822 RRE--YGHKMWAVIKIQSHVRRMIAMRRYRKLRLEHKQFAEVLQLR---KLEEQELLHRGNKHAR 881
            |.|  ...|..|.|.|||.:||.:..:||    :..|:.|...|..   |:..:||  |..|.|.
plant   822 RIELQLRKKRRATIIIQSQIRRCLCHQRY----VRTKKAAITTQCGWRVKVARREL--RNLKMAA 880

  Fly   882 EI--AEQHYRDRL-HELERREIQEQLENRRRVEVNMNIINDAARKQEEPVDDGKLVEAMFDFLPD 943
            :.  |.|..:.:| :::|......:||.:.|:|:      :.|:.||        :||:...|  
plant   881 KETGALQDAKTKLENQVEELTSNLELEKQMRMEI------EEAKSQE--------IEALQSVL-- 929

  Fly   944 SSSDAPTPHGGRETSVFNDLPHAQNVNQDDIIAPIHISEDEEDLSEFKFQKFAATYFQGNVNHQY 1008
                         |.:...|...|.....:      ||:.:..|::.|.|               
plant   930 -------------TDIKLQLRDTQETKSKE------ISDLQSVLTDIKLQ--------------- 960

  Fly  1009 AKKALKHPLLPLHTQGDQLAAQALWITILRFTGDMPEPKYHTMDRMDTTSVMSKVTATLGRNFIR 1073
                                        ||                ||....||..:.|      
plant   961 ----------------------------LR----------------DTQETKSKEISDL------ 975

  Fly  1074 SKEFQEAQL------MGLDPDAFLKQKPRSIRHKLVSLTLKRKNKLGEDVRR----------RLQ 1122
            ....|:.||      .||:....|..:...::..:.||    :||:.|..|:          |::
plant   976 QSALQDMQLEIEELSKGLEMTNDLAAENEQLKESVSSL----QNKIDESERKYEEISKISEERIK 1036

  Fly  1123 DDEYTADSYQSWLQSRPTSNLEKLHFIIGHGILRAELRDEIYCQICKQLTNNPLKSSHARGWILL 1187
            |:....|  ||.:....|.| :||..::.....:.:..|..:.:....:|.. ||...:..:.::
plant  1037 DEVPVID--QSAIIKLETEN-QKLKALVSSMEEKIDELDRKHDETSPNITEK-LKEDVSFDYEIV 1097

  Fly  1188 SLCVGCFAPSEKFVNYLRAFIREGPPGYAPYCEERLKRTFNNGTRNQPPSWLELQATKSKKPIML 1252
            |   ...|.:|:    |:|.:..        .|:::..:.||.|..|          :..|.|: 
plant  1098 S---NLEAENER----LKALVGS--------LEKKINESGNNSTDEQ----------EEGKYIL- 1136

  Fly  1253 PITFMDGNTKTLLADSATTARELCNQLSDKISLKDQFGFSLYIALFDKVSSLGSGGDHVMDAISQ 1317
                    .:..|.:.|:...|...:|:|:  .||         |.|.||||....|.......:
plant  1137 --------KEESLTEDASIDNERVKKLADE--NKD---------LNDLVSSLEKKIDETEKKYEE 1182

  Fly  1318 CEQYAKEQGAQERNAPWRLFFRKEIFAPWHEPTHD-QVATNLIYQQVVRGVKFGEYRCD------ 1375
            ..:..:|:..|..:|...|...|.......|...| :.|..:..||.:  |.....|..      
plant  1183 ASRLCEERLKQALDAETGLIDLKTSMQRLEEKVSDMETAEQIRRQQAL--VNSASRRMSPQVSFT 1245

  Fly  1376 --------KEEDLAMIAAQQYFIEYSTDMSMERLFTLLPNFIPDFCLSGVD-------------- 1418
                    .:|.||.|.::::..|......:||    .|:...|..|..|.              
plant  1246 GAPPLENGHQEPLAPIPSRRFGTESFRRSRIER----QPHEFVDVLLKCVSKNIGFSHGKPVAAL 1306

  Fly  1419 ---KAIERWAALVLQAYKKSYYVKDKIAPLKIKEDIVSYAKYKWPLLFSRFYEAYRNSGPNLPKN 1480
               |.:.||.  :.:|.|.|.:  |:|.|:                    |..|..|.     ::
plant  1307 TIYKCLMRWK--IFEAEKTSIF--DRIVPV--------------------FGSAIENQ-----ED 1342

  Fly  1481 DVIIAVNWTGVYVVDDQEQVLLELSFPEITAVSSQKTNKVFTQTFSLSTVRGEEFTFQSPNAEDI 1545
            |..:|...|....:    ..||:.|..:.::..|..|......:|.....:|    |:|.::.::
plant  1343 DNHLAYWLTNTSTL----LFLLQRSLRQQSSTGSSPTKPPQPTSFFGRMTQG----FRSTSSPNL 1399

  Fly  1546 RDLVVYFLDG-------LKKRSKYVIALQDYRAPSDGTSFLSFFKGDLIILEDESCGESVLNNGW 1603
            ...||..:|.       .::.:.||..:......:......|.....:..|::.||..||:|:. 
plant  1400 STDVVQQVDARYPALLFKQQLTAYVETMYGIIRENVKREVSSLLSSCIQSLKESSCDSSVVNSP- 1463

  Fly  1604 CIGRCDRSQERGDFPAETVYVLPTLS---------------------KPPQDILALFNIEEAHHG 1647
                 .:|.|..         ||..|                     |.||.:           .
plant  1464 -----SKSSEEN---------LPAKSSEENSPKKSSEENSPKESSGDKSPQKL-----------S 1503

  Fly  1648 RRLSMASNGGAVE------PRDRPHTLMEYALDHFRLPPKRTMSKTLTLSSKRSEELWRYSRDPI 1706
            ...|.:..|.||:      |.....:::|: |::..:..|:.. ..|.|..|...:.::|    |
plant  1504 DDNSPSKEGQAVKSSEENSPASSWQSIIEF-LNYILITWKKNY-VPLFLVQKMFSQTFQY----I 1562

  Fly  1707 KAPLLRKLQSKEEFAEEACFAFAAILKYMG--DLPSKRPRMGNEITDHIFDGPLKHE-------- 1761
            ...|...|..:.|:    |.....|....|  :|.|...:...|.....:| .|||.        
plant  1563 NVQLFNSLLLEREY----CTVNMGIKVKAGLDELESWCSQATEEFVGSSWD-ELKHTRQAVVLLV 1622

  Fly  1762 -------------------ILRDEIY--CQLMKQLTDNRNRMSEERGWELMWLATGLFACSQGLL 1805
                               :..:::|  |.|.|...|..:.:|.|                  ::
plant  1623 TEPKSTITYDDLTINLCSVLSTEQLYRICTLCKDKDDGDHNVSPE------------------VI 1669

  Fly  1806 KELLLFL-----RTRRHPISQDSMHRLQKTIRHGQRKYPPHQVEVEAIQHKTTQIFHKVYFPDDT 1865
            ..|.|.|     .:|...:..||.                                    .|.||
plant  1670 SNLKLLLTNEDENSRSFLLDDDSS------------------------------------IPFDT 1698

  Fly  1866 DEAFEVDSSTRAKDFCNNISQRLSLRTSEGFSLFVK 1901
            |   |:.|..:.|||. |:.....|..:..| ||:|
plant  1699 D---EISSCMQEKDFA-NVKSASELADNPNF-LFLK 1729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_523571.1 MYSc_Myo7 77..721 CDD:276832 288/656 (44%)
MyTH4 <1138..1245 CDD:214535 18/106 (17%)
FERM1_F1_Myosin-VII 1249..1347 CDD:340612 20/97 (21%)
B41 1251..1467 CDD:214604 46/247 (19%)
FERM_C1_MyoVII 1461..1559 CDD:270019 18/104 (17%)
SH3 1560..1624 CDD:473055 11/63 (17%)
MyTH4 1701..1849 CDD:214535 28/183 (15%)
FERM2_F1_Myosin-VII 1854..1951 CDD:340613 15/48 (31%)
B41 1856..2068 CDD:214604 15/46 (33%)
FERM_C2_MyoVII 2064..2159 CDD:270020
XIANP_171954.1 Myosin_N 8..51 CDD:460670 8/42 (19%)
MYSc_Myo11 75..719 CDD:276835 288/656 (44%)
PRK02224 <865..>1229 CDD:179385 95/518 (18%)
MyosinXI_CBD 1278..1699 CDD:271259 90/552 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.