DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ck and MYA2

DIOPT Version :9

Sequence 1:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:NP_001190465.1 Gene:MYA2 / 834412 AraportID:AT5G43900 Length:1565 Species:Arabidopsis thaliana


Alignment Length:1832 Identity:516/1832 - (28%)
Similarity:774/1832 - (42%) Gaps:448/1832 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GDYIWIEPASGREFDVAIGARVVSAEGRRIQVRDDDGDEVWLAPERRIKAMHASSVQ----GVED 67
            |.::|:|...    :..|...||...|..|:|....|..|    ..:|...:...|:    ||:|
plant    70 GSFVWVEDPD----EAWIDGEVVQVNGDEIKVLCTSGKHV----VTKISNAYPKDVEAPASGVDD 126

  Fly    68 MISLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILP-IYTGDQIKLYKERKIGELPPH 131
            |..|..|||.|:|:||..||..|.|||||||||:||||::.|| :|:...:..||...:|||.||
plant   127 MTRLAYLHEPGVLQNLHSRYDINEIYTYTGSILIAVNPFRRLPHLYSSHMMAQYKGASLGELSPH 191

  Fly   132 IFAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAISGKHS----WIEQQILEANP 192
            .||:.|.||..|......|.|::||||||||||||||:::|||.:.|:.:    .:||::||:||
plant   192 PFAVADAAYRQMINDGVSQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRSVEQKVLESNP 256

  Fly   193 ILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHSERNYHVFYCIL 257
            :|||||||||:||:|||||||:::|.|...|.|.||.|..||||:||:...:..|||||.||.:.
plant   257 VLEAFGNAKTVRNNNSSRFGKFVEIQFDEKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLC 321

  Fly   258 AGLSADEKSRLDLGMAADYKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLFSDQEIWEIIKLLAA 322
            |....|.| :..|.....|.||.....:..:..:||.|:...|.||.|:..|.:|...|..::||
plant   322 AAPQEDVK-KFKLEEPKKYHYLNQSKCLELDSINDAEEYHATRRAMDVVGISTEEQDAIFSVVAA 385

  Fly   323 LLHCGNIKY-KATVVDNLDATEIPEHINVERVAGLLGLPIQPLIDALTRRTLFAHGETVVSTLSR 386
            :||.|||:: |...:|:....:.....:::..|.||....:.|.|:|.:|.:....||:..||..
plant   386 ILHIGNIEFAKGEEIDSSIPKDDKSLFHLKTAAELLSCDEKALEDSLCKRIMVTRDETITKTLDP 450

  Fly   387 DQSVDVRDAFVKGIYGRMFVHIVRKINTAIFKPRGTSRNAIGVLDIFGFENFDQNSFEQFCINYA 451
            :.:...|||..|.:|.|:|..:|.|||::|.:.. .|:..||||||:|||:|..|||||||||..
plant   451 EAATLSRDALAKVMYSRLFDWLVDKINSSIGQDH-DSKYLIGVLDIYGFESFKTNSFEQFCINLT 514

  Fly   452 NENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQDALDLIAIKQLNIMALIDEEARFPKGTDQ 516
            ||.|||.|.||:||:|||||..|.|||.:||||||||.||||..|...|:||:||...||:.|.:
plant   515 NEKLQQHFNQHVFKMEQEEYKKEEINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHE 579

  Fly   517 TMLAKLHKTHGSHKNYLKPKSDINTSFGLNHFAGVVFYDTRGFLDKNRDTFSPDLLHLVSQSTNK 581
            |...||::|..:||.:.|||. ..:.|.:.|:||.|.|.|..|||||:|....:...|::.|:..
plant   580 TFAQKLYQTFKTHKRFTKPKL-ARSDFTICHYAGDVTYQTELFLDKNKDYVIAEHQALLNSSSCS 643

  Fly   582 FLRQIFAQDIEMGAETRK-RTPTLSTQFRKSLDALMKTLSSCQPFFIRCIKPNELKKPMMFDRGL 645
            |:..:|.   .|..:::: :..::.|:|::.|.:|::.|::.:|.:|||||||.|.||.:|:...
plant   644 FVASLFP---PMSDDSKQSKFSSIGTRFKQQLVSLLEILNTTEPHYIRCIKPNNLLKPGIFENEN 705

  Fly   646 CCRQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLIPGVPPAHRTDCQAATSRICAVVLGKSD 710
            ..:|||..|:||.|||..||||.|..|.||:.|:..|.|.| ....:|..||..::...| |...
plant   706 ILQQLRCGGVMEAIRISCAGYPTRKHFDEFLARFGILAPEV-LVKNSDDPAACKKLLDKV-GLEG 768

  Fly   711 YQLGHTKVFLKDAHDLFLEQERDRVLTRKILILQRSIRGWVYRRRFLRLRAAAITVQRFWKGYAQ 775
            ||:|.|||||:......|:..|..||.|...|:||.:|.::.::.|:.||.:|..:|...:||..
plant   769 YQIGKTKVFLRAGQMADLDTRRTEVLGRSASIIQRKVRSYLAKKSFIVLRNSAKQIQSVCRGYLA 833

  Fly   776 RKRYRNMR--VGYMRLQALIRSRVLSHRFRHLRGHIVGLQAHARGYLVRRE--YGHKMWAVIKIQ 836
            |..|..||  ...:::|..:|..:....:..|....|.:||..||.:.|:|  :..:..|.|.||
plant   834 RSVYEGMRREAAALKIQRDLRRFLARKAYTELYSAAVSVQAGMRGMVARKELCFRRQTKAAIIIQ 898

  Fly   837 SHVRRMIAMRRYRKLRLEHKQFAEVLQ-----------LRKL-----EEQELLHRGNKHAREIAE 885
            :..|..:|...||||    |:.|...|           ||||     |...|....||..:::.|
plant   899 TWCRGYLARLHYRKL----KKAAITTQCAWRSKVARGELRKLKMAARETGALQAAKNKLEKQVEE 959

  Fly   886 QHYRDRLHELERREIQEQLENR---------------RRVEVNMNIINDAARK--------QEEP 927
            ..:|.:|.:..|.:::|..:..               :..|..:....:||:|        :|.|
plant   960 LTWRLQLEKRIRTDLEEAKKQESAKAQSSLEELQLKCKETEALLIKEREAAKKIAETAPIIKEIP 1024

  Fly   928 VDDGKLVEAMF---DFLPDSSSDAPTPHGGRETSVFNDLPHAQNVNQDDIIAPIHISEDEEDLSE 989
            |.|.:|::.:.   :.|....|......|..|    ..|.....::||.:...:   |.|..|.:
plant  1025 VVDQELMDKITNENEKLKSMVSSLEMKIGETE----KKLQETTKISQDRLNQAL---EAESKLVK 1082

  Fly   990 FKFQKFAATYFQGNVNHQYAKKALKHPLLPLHTQGDQLAAQALWITILRFTGDMPEPKYHTMDRM 1054
            .|                .|.:.|:..:|.:..:...:..|.:...:....|..|......::..
plant  1083 LK----------------TAMQRLEEKILDMEAEKKIMHQQTISTPVRTNLGHPPTAPVKNLENG 1131

  Fly  1055 DTTSVMSKVTATLGRNFIRSKEFQEA-----------------QLMGLDP--------DAFLKQK 1094
            ..|::              .|||.||                 |:|.:|.        ..|...|
plant  1132 HQTNL--------------EKEFNEAEFTTPVDGKAGKSAAERQIMNVDALIDCVKDNIGFSNGK 1182

  Fly  1095 PRSIRHKLVSLTLKRKNKLGEDVRRRLQDDEYTADSYQSWLQSRPTSNLEKLHFIIGHGILRAEL 1159
            |      :.:.|:                  |....:....:|..|:..::|..:||..|   |.
plant  1183 P------VAAFTI------------------YKCLLHWKCFESEKTNVFDRLIQMIGSAI---EN 1220

  Fly  1160 RDEIYCQICKQLTNNPLKSSHARGWILLSLCVGCFAPSEKFVNYLRAFIREGPPGYAPYCEERLK 1224
            .|:               :||...|:          .|...:.:|              .::.||
plant  1221 EDD---------------NSHLAYWL----------TSTSALLFL--------------LQKSLK 1246

  Fly  1225 RTFNNGTRNQPPSWLELQATKSKKPIMLPITFMDGNTKTLLADSATTARELCNQLSDKISLKDQF 1289
               .||:          .||:||||                  .|:|                  
plant  1247 ---TNGS----------GATQSKKP------------------PAST------------------ 1262

  Fly  1290 GFSLYIALFDKV-----SSLGSGGDHVMDAISQCEQYAKEQGAQERNAPWRLFFRKEIFAPWHEP 1349
                  :||.::     ||..||.   :.|.::....|..:.. |...|..||  |:..|.:.|.
plant  1263 ------SLFGRMAMSFRSSPASGN---LAAAAEAAALAVVRPV-EAKYPALLF--KQQLAAYVEK 1315

  Fly  1350 THDQVATNLIYQQVVRGVKFGEYRCDKEEDLAMIAAQQYFIEYSTDMSMERLFTLLPNFIPDFCL 1414
            ....|..||                 |.|                      |.|||         
plant  1316 MFGMVRDNL-----------------KRE----------------------LSTLL--------- 1332

  Fly  1415 SGVDKAIERWAALVLQAYKKSYYVKDKIAPLKIKEDIVSYAKYKWPLLFSRFYEAYRNSGPNLPK 1479
                       :|.:||.:.|                      |..:|.|.     |:.|.:.| 
plant  1333 -----------SLCIQAPRSS----------------------KGGMLRSG-----RSFGKDSP- 1358

  Fly  1480 NDVIIAVNWTGVYVVDDQEQVLLELSFPEITAVSSQKTNKVFTQTFSLSTV--------RGEEFT 1536
                 ||:|..  ::|....:|:.|....:..|..|   |:::||||...|        |.|..|
plant  1359 -----AVHWQS--IIDGLNSLLVTLKENHVPLVLIQ---KIYSQTFSYINVQLFNSLLLRKECCT 1413

  Fly  1537 FQSPNAEDIRDLVVYFLDGLKKRSKYVIALQDYRAPS-DGTSFLSFFKGDLIILEDESCGESVLN 1600
            |.  |.|.::       .||.:...:....::|..|| :....:....|.|:|.:........:.
plant  1414 FS--NGEFVK-------SGLAELELWCCQAKEYSGPSWEELKHIRQAVGFLVIHQKYRISYDEIA 1469

  Fly  1601 NGWCIGRCDRSQERGDFPAETVYVLPTLSKPPQDILALFNI-----EEAHHGRRLSMASNGGAVE 1660
            |..|                     |.||     :..|:.|     :::::.|.:|.       |
plant  1470 NDLC---------------------PVLS-----VQQLYRICTLYWDDSYNTRSVSQ-------E 1501

  Fly  1661 PRDRPHTLM-----EYALDHFRLPPKRTMSKTLTLSSKRSEELWRYSRDPIKAPLLRK----LQS 1716
            ......|||     :...|.|.|....::.               :|.|.|.:.:..|    ::.
plant  1502 VISSMRTLMTEESNDADSDSFLLDDDSSIP---------------FSIDDISSSMEEKDFVGIKP 1551

  Fly  1717 KEEFAEEACFAF 1728
            .||..|...|.|
plant  1552 AEELLENPAFVF 1563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_001285949.1 MYSc 64..733 CDD:214580 296/675 (44%)
MYSc_Myo7 77..721 CDD:276832 286/650 (44%)
MyTH4 <1138..1245 CDD:214535 17/106 (16%)
B41 1251..1467 CDD:214604 33/220 (15%)
FERM_B-lobe 1355..1439 CDD:271216 12/83 (14%)
FERM_C1_MyoVII 1461..1559 CDD:270019 27/105 (26%)
SH3 1560..1624 CDD:302595 8/64 (13%)
MyTH4 1701..1849 CDD:214535 9/32 (28%)
B41 1856..2068 CDD:214604
FERM_M 1966..2068 CDD:278785
FERM_C2_MyoVII 2064..2159 CDD:270020
MYA2NP_001190465.1 Myosin_N 73..108 CDD:280832 10/42 (24%)
MYSc 117..790 CDD:214580 297/680 (44%)
MYSc_Myo11 136..779 CDD:276835 286/650 (44%)
IQ 889..911 CDD:197470 6/21 (29%)
RILP-like 964..1083 CDD:304877 22/125 (18%)
MyosinXI_CBD 1159..1535 CDD:271259 112/656 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 530 1.000 Domainoid score I63
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8405
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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