DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ck and XID

DIOPT Version :9

Sequence 1:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:NP_180882.2 Gene:XID / 817886 AraportID:AT2G33240 Length:1770 Species:Arabidopsis thaliana


Alignment Length:2075 Identity:570/2075 - (27%)
Similarity:886/2075 - (42%) Gaps:502/2075 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VIVTRGDYIWIEPASGREFDVAIGARVVSAEGRRIQVRDDDGDEVWLAPERRIKAMHASSVQ--- 63
            |.||.|..:|:|...    :..:...||.|.|:.|:|.......|     .::.|:|....:   
plant    22 VKVTVGSQVWVEDPD----EAWLDGEVVEANGQEIKVNCQTKTVV-----AKVNAVHPKDPEFPE 77

  Fly    64 -GVEDMISLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILP-IYTGDQIKLYKERKIG 126
             ||:||..|..|||.|:|.||..||..|.||||||:||:||||::.|| :|..:.::.||....|
plant    78 LGVDDMTKLAYLHEPGVLLNLKARYNANEIYTYTGNILIAVNPFKRLPHLYGNEIMEQYKGTDFG 142

  Fly   127 ELPPHIFAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAISGKHS----WIEQQI 187
            ||.||.||:.|:||..|......|.|::|||||||||||||:::||||.:.||..    .:|||:
plant   143 ELSPHPFAVADSAYRKMINEGVSQAILVSGESGAGKTESTKMLMQYLAYMGGKAESEGRSVEQQV 207

  Fly   188 LEANPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHSERNYHV 252
            ||:||:|||||||||:||:|||||||:::|.|:..|.|.||.|..||||:||:...:..|||||.
plant   208 LESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFNHMGRISGAAIRTYLLERSRVCQVSDPERNYHC 272

  Fly   253 FYCILAGLSADEKSRLDLGMAADYKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLFSDQEIWEII 317
            || :|......|..|..||..:.:.||...|....:..||:.|:...|.||.|:..|.:|...|.
plant   273 FY-MLCAAPEQETERYQLGKPSTFHYLNQSNCHALDAIDDSKEYLATRKAMDVVGISPEEQDAIF 336

  Fly   318 KLLAALLHCGNIKY-KATVVDNLDATEIPEHINVERVAGLLGLPIQPLIDALTRRTLFAHGETVV 381
            :::||:||.|||:: |:...|..:..:.....:::..|.|.....:.|.::|..|.:...||::.
plant   337 RVVAAILHLGNIEFAKSEESDGAEPKDDKSRFHLKVAAKLFMCDEKALENSLCNRVMVTRGESIT 401

  Fly   382 STLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTAIFKPRGTSRNAIGVLDIFGFENFDQNSFEQF 446
            ..|....:...|||..|.:|.::|..:|.|||.:|.:. .:|:..||||||:|||:|..||||||
plant   402 KPLDPGSAALSRDALAKIVYSKLFDWLVTKINNSIGQD-SSSKYIIGVLDIYGFESFKTNSFEQF 465

  Fly   447 CINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQDALDLIAIKQLNIMALIDEEARFP 511
            |||..||.|||.|.||:||:|||||..|.|:|.:|||:||||.||||..|...|:||:||...||
plant   466 CINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFP 530

  Fly   512 KGTDQTMLAKLHKTHGSHKNYLKPKSDINTSFGLNHFAGVVFYDTRGFLDKNRDTFSPDLLHLVS 576
            :.|..|:..||::|.||||.:.|||. ..|.|.:.|:||.|.|.|..|||||:|....:...|::
plant   531 RSTHDTLAEKLYQTFGSHKRFTKPKL-ARTDFTICHYAGDVTYQTELFLDKNKDYVVGEHQSLMN 594

  Fly   577 QSTNKFLRQIFAQDIEMGAETRKRTPTLSTQFRKSLDALMKTLSSCQPFFIRCIKPNELKKPMMF 641
            .|...|:..:|.:..|..:::.|.: ::.:||::.|.:|::||::.:|.:|||:|||.:.||.:|
plant   595 SSDCSFVSSLFPKSREESSKSSKFS-SIGSQFKQQLQSLLETLNTTEPHYIRCVKPNNVLKPEIF 658

  Fly   642 DRGLCCRQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLIPGVPPAHRTDCQAATSR------ 700
            :......|||..|:||.|||..||||.|..|.||:.|:|.|.|           .||.|      
plant   659 ENVNVLHQLRCGGVMEAIRISCAGYPTRKPFNEFLTRFRILAP-----------EATERSFDEVD 712

  Fly   701 ICAVVLGKSD---YQLGHTKVFLKDAHDLFLEQERDRVLTRKILILQRSIRGWVYRRRFLRLRAA 762
            .|..:|.:.|   :|:|.|||||:......|:..|..||.....|:||.:..::.|:::|.|::|
plant   713 ACKKLLARVDLKGFQIGKTKVFLRAGQMAELDAHRAEVLGHSARIIQRKVITYLSRKKYLLLQSA 777

  Fly   763 AITVQRFWKGYAQRKRYRNMR--VGYMRLQALIRSRVLSHRFRHLRGHIVGLQAHARGYLVRRE- 824
            :..:|.|.:|:..|.:::..|  ...:|:|...|:.:....|:.|....:.:|:..|....|.| 
plant   778 STEIQAFCRGHIARVQFKATRREAASVRIQKQARTYICQTAFKKLCASAISIQSGLRAMAARVEF 842

  Fly   825 -YGHKMWAVIKIQSHVRRMIAMRRYR-------------KLRLEHKQFAEVLQLRKLEE------ 869
             |..|..|.|.|||.:||.:..|||.             ::::.|:      :||||:.      
plant   843 QYRTKRKAAIIIQSQIRRCLCRRRYLRTKKAAITTQCGWRVKVAHR------ELRKLKMAAKETG 901

  Fly   870 --QELLHRGNKHAREIA-----EQHYRDRLHELERREIQEQLENRRRVEVNMNIINDAARKQEEP 927
              |:...:..|...|:.     |:..|..|.:::.:|: |.|.:... ::.:.:......|.||.
plant   902 ALQDAKTKLEKEVEELTSCLELEKQMRMELEQVKTQEV-EDLRSALN-DMKLQLGETQVTKSEEI 964

  Fly   928 VDDGKLVEAMFDFLPDSSSDAPTPHGGRETSVFNDLPHAQNVNQDDIIAPIHISEDEED------ 986
            :   ||..|:.|...:....|      :|..:.|||. |:|....|:::.:....||.|      
plant   965 L---KLQSALQDMQLEFEELA------KELEMTNDLA-AENEQLKDLVSSLQRKIDESDSKYEET 1019

  Fly   987 --LSEFKFQKFAATYFQGNVNHQYAKKALKHPLLPLHTQGDQLAAQALWITILRFTGDMPEPKYH 1049
              |||.:.::......||             .::.|..:..:|  :||..|:        |.|..
plant  1020 SKLSEERVKQEVPVIDQG-------------VIIKLEAENQKL--KALVSTL--------EKKID 1061

  Fly  1050 TMDRM-DTTS----------------VMSKVTATLGR--NFIRSKEFQEAQLMGLDPDAFLKQKP 1095
            ::||. |.||                ::|.:.|...|  ..:.|.|.:..:..|.|.....|:.|
plant  1062 SLDRKHDVTSSNISDQLKESASSDYEMLSNLAAENERLKALVSSLENENYENDGNDSPNEQKEGP 1126

  Fly  1096 RSIRHKLVSLTLKRKNKLGEDVRRRLQDDEYTADSYQSWLQSRPTSNLEKLHFIIGHGILRAELR 1160
            :.::.::          |.||..   .|||.|..      .:....:|..|..::...|...|.:
plant  1127 QMLKEEI----------LAEDFS---IDDEMTNK------LAAENKDLYDLVDLLERKIDETEKK 1172

  Fly  1161 DEIYCQIC----KQLTNNPLKSSHARGWILLSLCVGCFAPSEKFVNYLRAFIREGPPGYAPYCEE 1221
            .|...::|    ||:.:...|...|                                  :..|||
plant  1173 YEEASKLCEERLKQVVDTEKKYEEA----------------------------------SRLCEE 1203

  Fly  1222 RLKRTFNNGTRNQPPSWLELQATKSKKPIMLPITFMDGNTKTLLADSATTARELCNQLSDKISLK 1286
            |||:..:..|:     .:||:.  |.:.:...::.|:...|.|      ..:.|.|..|.|:|.:
plant  1204 RLKQVVDTETK-----LIELKT--SMQRLEEKVSDMEAEDKIL------RQQALRNSASRKMSPQ 1255

  Fly  1287 DQFGFSLYIALFDKVSSLGSGGDHVMDAISQCEQYA----KEQGAQERNAPWRLFFRKEIFAPWH 1347
            ......:::.||..|.:    |.|        |.:|    :..||..       |.|.:|....|
plant  1256 KSLDLFVFMYLFQPVEN----GHH--------ESFAPIPSRRFGAMS-------FRRSQIEQQPH 1301

  Fly  1348 EPTHDQVATNLIYQQVVRGVKFGEYRCDKEEDLAMIAAQQYFIEYSTDMSMERLFTLLPNFIPDF 1412
            |      ..:::.:.|.:.|.|...:        .:||                ||:.       
plant  1302 E------FVDVLLKCVSKNVGFSHGK--------PVAA----------------FTIY------- 1329

  Fly  1413 CLSGVDKAIERWAALVLQAYKKSYYVKDKIAPLKIKEDIVSYAKYKWPLLFSRFYEAYRNSGPNL 1477
                  |.:..|.  :.:|.|.|.:  |:|.|:                    |..|..|     
plant  1330 ------KCLIHWK--LFEAEKTSVF--DRIVPI--------------------FGSAIEN----- 1359

  Fly  1478 PKNDVIIAVNWTGVYVVDDQEQVLL----ELSFPEITAVSSQKTNKVFTQTFSLSTVRGEEFTFQ 1538
            |::|..:|      |.:.:...:|.    .|.....|..|.:|..:. |..|...| :|    |:
plant  1360 PEDDSNLA------YWLTNTSTLLFLLQRSLKSHSTTGASPKKPPQP-TSFFGRMT-QG----FR 1412

  Fly  1539 SPNAEDIRDLVVYFLDGLKKRSKYVIALQDYRAPSDGTSFLSFFKGDLIILEDESCG-------- 1595
            ||::..:...||..:|     ::|...|               ||..|....:...|        
plant  1413 SPSSASLSGDVVQQVD-----ARYPALL---------------FKQQLTAYIETIYGIFQENVKR 1457

  Fly  1596 --ESVLNNGWCI-GRCDRSQERGDFPAETVYV---------LPTLSKPPQDILALFNIEEAHHGR 1648
              ..||::  || |..|.|.|   |.|||:..         .|:...||:               
plant  1458 KLAPVLSS--CIQGLKDSSHE---FSAETLSAESSEQNSPEKPSEENPPE--------------- 1502

  Fly  1649 RLSMASNGGAVEPRDRPHTLMEYALDHFRLPPKRTMSKTLTLSSKRSEELWRYSRDPIKAPLLRK 1713
            :||..::.|.:..        :|                  |::|.||:     ..|.| |....
plant  1503 KLSEDNSSGKLSE--------DY------------------LAAKPSED-----NSPAK-PSEEN 1535

  Fly  1714 LQSK-EEFAEEACFAFAAILKYMGDLPSKRPRMGNEITDHIFD---------GPLKHE----ILR 1764
            .|:| .|...:|        |...:....:|...|..|:...|         |.||..    .|.
plant  1536 SQAKLSEVNPQA--------KPSAENSLAKPSEENSPTETWQDVIGLLNQLLGTLKKNYVPLFLA 1592

  Fly  1765 DEIYCQLMKQLTDNRNRMSEER-------GWEL-MWLATGLFACSQGL----------LKE---- 1807
            .:|:||..:.:.........:|       |.:: :||......|||..          ||.    
plant  1593 QKIFCQTFQDINVQLFNSLLQRECCTFIMGKKVNVWLNELESWCSQATEDFVGSSWDELKNTRQA 1657

  Fly  1808 LLLFLRTRRHPISQD-------------SMHR---LQKTIRHGQRKYPPHQVEVEAIQHKTTQIF 1856
            |:|.:..::..|:.|             .::|   |.|...|..:...|     :.|.:.     
plant  1658 LVLLVTEQKSTITYDDLTTNLCPALSTQQLYRICTLCKIDDHEDQNVSP-----DVISNL----- 1712

  Fly  1857 HKVYFPDDTDE---------------AFEVDSSTRAKDFCNNISQRLSLRTSEGFSLFVK 1901
             |:...|:.::               |.|:.:|.:.||| .|:...:.|..:..|. |:|
plant  1713 -KLLVTDEDEDSRSFLLDNNSSIPFAADEISNSMQEKDF-TNVKPAVELADNPNFH-FLK 1769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_001285949.1 MYSc 64..733 CDD:214580 295/683 (43%)
MYSc_Myo7 77..721 CDD:276832 285/658 (43%)
MyTH4 <1138..1245 CDD:214535 19/110 (17%)
B41 1251..1467 CDD:214604 37/219 (17%)
FERM_B-lobe 1355..1439 CDD:271216 12/83 (14%)
FERM_C1_MyoVII 1461..1559 CDD:270019 22/101 (22%)
SH3 1560..1624 CDD:302595 18/74 (24%)
MyTH4 1701..1849 CDD:214535 37/199 (19%)
B41 1856..2068 CDD:214604 13/61 (21%)
FERM_M 1966..2068 CDD:278785
FERM_C2_MyoVII 2064..2159 CDD:270020
XIDNP_180882.2 Myosin_N 28..64 CDD:280832 9/44 (20%)
MYSc 76..744 CDD:214580 294/682 (43%)
MYSc_Myo11 92..736 CDD:276835 285/658 (43%)
Tropomyosin_1 926..1068 CDD:289488 37/176 (21%)
PRKG1_interact 937..1023 CDD:292521 21/97 (22%)
MIS13 987..1241 CDD:285420 65/343 (19%)
MyosinXI_CBD 1298..1739 CDD:271259 108/615 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 530 1.000 Domainoid score I63
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8405
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

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