DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ck and XIG

DIOPT Version :9

Sequence 1:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:NP_179619.2 Gene:XIG / 816548 AraportID:AT2G20290 Length:1493 Species:Arabidopsis thaliana


Alignment Length:1583 Identity:459/1583 - (28%)
Similarity:717/1583 - (45%) Gaps:300/1583 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GDYIWIEPASGREFDVAIGARVVSAEGRRIQVRDDDGDEVWLAPERRIKAMHASSVQGVEDMISL 71
            |..:|::...    :..|...||...|..|:|:...|..|.................||:||.:|
plant    20 GSIVWVQDPE----EAWIDGEVVEVNGEDIKVQCTSGKTVVAKGSNTYPKDMEVPPSGVDDMTTL 80

  Fly    72 GDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILP-IYTGDQIKLYKERKIGELPPHIFAI 135
            ..|||.|:|:||..||..:.||||||:||:||||::.|| :|....:..||...:|||.||.||:
plant    81 AYLHEPGVLQNLKSRYYIDEIYTYTGNILIAVNPFKQLPNLYNDHMMAQYKGAALGELSPHPFAV 145

  Fly   136 GDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAISGK----HSWIEQQILEANPILEA 196
            .|.||..|......|.|::||||||||||:.|::::|||.:.|:    ...:|.|:||:||:|||
plant   146 ADAAYRQMINEGISQSILVSGESGAGKTETAKMLMKYLAKMGGRAVSDRRTVEDQVLESNPVLEA 210

  Fly   197 FGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHSERNYHVFYCILAGLS 261
            ||||||::|:|||||||:::|.|...|.|.||.|..||||:||:...:..|||||.|| :|....
plant   211 FGNAKTVKNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFY-MLCAAP 274

  Fly   262 ADEKSRLDLGMAADYKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLFSDQEIWEIIKLLAALLHC 326
            .::|.:|.|....:::||...:.|..:|.||:.|::..|.||.::..:.:|...|.:::||:||.
plant   275 PEDKRKLKLNDPTEFRYLNQSHCIKLDGVDDSKEYTKTREAMGIVGINLEEQEAIFRVVAAILHL 339

  Fly   327 GNIKYKATVVDNLDAT----EIPEHINVERVAGLLGLPIQPLIDALTRRTLFAHGETVVSTLSRD 387
            |||::  .:.:..|::    |..:::.:  .|.|.....|.|.|:|.:|.:....||:...|..:
plant   340 GNIEF--AIGEEPDSSVPTDESKKYLKI--AAELFMCDEQALEDSLCKRIMVTPEETISRCLDPN 400

  Fly   388 QSVDVRDAFVKGIYGRMFVHIVRKINTAIFKPRGTSRNAIGVLDIFGFENFDQNSFEQFCINYAN 452
            .:...|||..|.:|.|:|..||.|||.:|.:. ..|::.||||||:|||:|..|||||||||..|
plant   401 SAALSRDALAKFVYSRLFDWIVNKINNSIGQD-PDSKDMIGVLDIYGFESFKTNSFEQFCINLTN 464

  Fly   453 ENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQDALDLIAIKQLNIMALIDEEARFPKGTDQT 517
            |.|||.|.||:.|:|||||..|.|.|..|.|.||:..|:||..|:..|:||:||...||:.|.:|
plant   465 EKLQQHFTQHVLKMEQEEYTKEEIEWSQITFPDNRYVLELIEKKRGGIIALLDEACMFPRSTHKT 529

  Fly   518 MLAKLHKTHGSHKNYLKPKSDINTSFGLNHFAGVVFYDTRGFLDKNRDTFSPDLLHLVSQSTNKF 582
            ...||::|...:|.:.|||.. .|.|.:.|:||.|.|.|..||:||:|....:...|:..|...|
plant   530 FSQKLYETLKDNKYFSKPKLS-RTDFTICHYAGDVTYQTEQFLEKNKDYVVAEHQALLGASRCTF 593

  Fly   583 LRQIFAQDIEMGAETRKRTPTLSTQFRKSLDALMKTLSSCQPFFIRCIKPNELKKPMMFDRGLCC 647
            :..:|...:| .|..:.:..::::||::.|.:|::.|::.:|.:|||:|||.|.||.:|:.....
plant   594 IAGLFPPLVE-DANKQSKFSSIASQFKQQLASLIEGLNTTEPHYIRCVKPNNLLKPSIFENQNSL 657

  Fly   648 RQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLIPGVPPAHRTDCQAATSRICAVVLGKSDYQ 712
            :|||..|:|||||:.|||||.|..|.||::|:. ::........:|.:||..::...| |.:.:|
plant   658 QQLRCGGVMETIRVCRAGYPTRKHFDEFLDRFG-ILDSATLDKSSDEKAACKKLLETV-GLNGFQ 720

  Fly   713 LGHTKVFLKDAHDLFLEQERDRVLTRKILILQRSIRGWVYRRRFLRLRAAAITVQRFWKGYAQRK 777
            :|.||||||......|:..|..||.|...|:|...|.::.|:.|:.||.|||.:|..::|...|.
plant   721 IGKTKVFLKAGQMAELDDRRTEVLGRAACIIQWKFRSYLTRQSFIMLRNAAINIQAVYRGQVARY 785

  Fly   778 RYRNMR--VGYMRLQALIRSRVLSHRFRHLRGHIVGLQAHARGYLVRREYGHKMWAVIKIQSHVR 840
            |:.|:|  ...:::|..:|..:  .|.|.....:|.:|:..||...|.....|..|...||||.|
plant   786 RFENLRREAAALKIQRALRIHL--DRKRSYIEAVVTVQSGLRGMAARVVLRRKTKATTVIQSHCR 848

  Fly   841 RMIAMRRYRKL-------------RLEHKQFAE---------VLQLRK--LEE--QELLHRGNKH 879
            |:.|...|:||             ||..|:..:         |||..|  |.|  :||..|.:..
plant   849 RLRAELHYKKLKKAAITTQSAWRARLARKELRKLKTDARDTVVLQAAKSMLAEKVEELTWRLDLE 913

  Fly   880 AR-----EIAEQHYRDRLHELERREIQEQLENRRRVEVNMNIIN--DAARK--------QEEPVD 929
            .|     |:::.....:| :|...|||.|.|     |..::::.  :||:|        :|.||.
plant   914 KRMRVDMEVSKAQENAKL-QLALEEIQLQFE-----ETKVSLLKEVEAAKKTAAIVPVVKEVPVV 972

  Fly   930 DGKLVEAMFDFLPDSSSDAPTPHGGRETSVFNDLPHAQNVNQDDIIAPIHISEDEEDLSEFKFQK 994
            |..|:|.:                   ||        :|.....::..:.:..||   :|.||::
plant   973 DTVLMEKL-------------------TS--------ENEKLKSLVTSLELKIDE---TEKKFEE 1007

  Fly   995 FAATYFQGNVNHQYAKKAL------KHPLLPLHTQGDQLAAQALWITILRFTGDMPEPKYHTMDR 1053
                  ...::.:..||||      .:....:|...::|....|....|:               
plant  1008 ------TKKISEERLKKALDAENKIDNLKTAMHNLEEKLKEVKLENNFLK--------------- 1051

  Fly  1054 MDTTSVMSKVTATLGRNFIRS--KEFQ-------EAQLMGLDPDAFLKQKPRSIRHKLVSLTLKR 1109
               .||::....|....|:.:  |..|       |:||.|.:                 ..|..|
plant  1052 ---ESVLTTPVKTASGRFLSTPLKNLQNGLFTSEESQLSGAE-----------------FTTPPR 1096

  Fly  1110 KNKLGEDVRRR-------LQDDEYTADSYQ---SWLQSRPTSNLEKLHFIIGHGILRAELRDEIY 1164
            ..:.|.|.:.|       .:|.:...:|..   .:.|.:|.:.......::......|| |..::
plant  1097 IQESGSDTKSRGSHIDPQHEDVDALINSVTKNVGFSQGKPVAAFTIYKCLLHWKSFEAE-RTNVF 1160

  Fly  1165 CQICKQLTNNPLK----SSHARGWILLSLCVGCFAPSEKFVNYLRAFIREGPPGYAPYCEE-RLK 1224
            .::. |:..:.:|    .::...|:         :.:...:..|:..::.|..|..|..:. .|.
plant  1161 DRLV-QMIGSAIKDEDNDANLAYWL---------SNTSTLLFMLQQSLKSGGTGATPLRQSPSLV 1215

  Fly  1225 RTFNNGTRNQPPSWLELQATKSKKP----------------------------------IMLPIT 1255
            |....|.|:  |:...::...:|.|                                  |..|.|
plant  1216 RWMTKGFRS--PAAEAIRPVDAKDPALHFKQQLEAYVEKILGIIWDNLKKELNTVLALCIQAPKT 1278

  Fly  1256 FMDGNTKTLLADSATTA---RELCNQLSDKIS-LKDQF------------GFSL--------YIA 1296
            | .||...    |.|||   :::...|...:| ||:.|            .|||        .:.
plant  1279 F-KGNALI----SITTANYWQDIIEGLDALLSTLKESFVPPVLIQKIFSQAFSLINVQVCNSLVT 1338

  Fly  1297 LFDKVSSLGSGGDHVMDAISQCEQYAKEQGAQERNAPWRLFFRKEIFA--PWHEPTHDQVATNLI 1359
            ..|..|.:  .|:::...:.:.|::..|              .||.:|  .|.|..|.:.|...:
plant  1339 RPDNCSFI--NGEYLKSGLEKLEKWCCE--------------TKEEYAGSSWDELKHTRQAVGFL 1387

  Fly  1360 YQQVVRGVKFGEYRCDKEEDLAMIAAQQYF---------------IEYSTDMSMERLFTLLPNF- 1408
            .......:.:.|...|...:|.:   ||:|               :......||..:.|...:| 
plant  1388 LIHKKYNISYDEIANDLCPNLQI---QQHFKLCTLYKDEIYNTKSVSQDVIASMTGVMTDSSDFL 1449

  Fly  1409 ------------IPDFCLSGVDK 1419
                        |.|.|.|..||
plant  1450 LKEDSSNIISLSIDDLCSSMQDK 1472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_001285949.1 MYSc 64..733 CDD:214580 279/677 (41%)
MYSc_Myo7 77..721 CDD:276832 268/652 (41%)
MyTH4 <1138..1245 CDD:214535 16/111 (14%)
B41 1251..1467 CDD:214604 45/223 (20%)
FERM_B-lobe 1355..1439 CDD:271216 17/93 (18%)
FERM_C1_MyoVII 1461..1559 CDD:270019
SH3 1560..1624 CDD:302595
MyTH4 1701..1849 CDD:214535
B41 1856..2068 CDD:214604
FERM_M 1966..2068 CDD:278785
FERM_C2_MyoVII 2064..2159 CDD:270020
XIGNP_179619.2 Myosin_N 23..58 CDD:280832 9/38 (24%)
MYSc 73..740 CDD:214580 279/676 (41%)
MYSc_Myo11 86..729 CDD:276835 268/652 (41%)
DUF4200 922..1052 CDD:290574 33/189 (17%)
MyosinXI_CBD 1112..1463 CDD:271259 61/387 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 530 1.000 Domainoid score I63
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8405
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.