DRSC/TRiP Functional Genomics Resources

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Protein Alignment ck and si:ch211-18i17.2

DIOPT Version :9

Sequence 1:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:XP_700015.5 Gene:si:ch211-18i17.2 / 571341 ZFINID:ZDB-GENE-030131-5404 Length:761 Species:Danio rerio


Alignment Length:541 Identity:120/541 - (22%)
Similarity:211/541 - (39%) Gaps:102/541 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1700 RYSRDPIKAPLL---------RKLQSK--EEFAEEACFAFAAILKYMGDLPSKRPRMGNEITDHI 1753
            ||::.|:.||||         ..:.||  ....|||...|..:.:    |.|.|..:  .:...|
Zfish   227 RYTQSPLYAPLLPFPYGSLHHTHMASKGYTSIREEAVRLFNCLQQ----LESAREPI--PLIQGI 285

  Fly  1754 FDGPLKHEILRDEIYCQLMKQLTDNRNRMSEE-------RGWELMWLATGLFACSQGLLKELLLF 1811
            ....|....||||:||||:||.:...:|:..:       |.|:|:...:..|..|.|:|:.|...
Zfish   286 LQTCLDLRPLRDELYCQLIKQTSTTSSRVQTQTNPNPQLRYWQLLTCMSCTFLPSCGILRYLRFH 350

  Fly  1812 LRTRRHPISQDSM---------HRLQKTIRHGQRKYPPHQVEVEAIQHKTTQIFHKVYFPDDTDE 1867
            |: |...:|.|..         ..|:||  .| |:..|...|::.:..: .:|...|::|.....
Zfish   351 LK-RVQSLSVDPEVESYASFIGQALEKT--RG-RECVPSWEEIQGLMGR-QEILCTVHYPGPGCC 410

  Fly  1868 AFEVDSSTRAKDFCNNISQRLSLRTSEG-FSLFVKIADKVISVPEGDFFFDFVRHLTDWIKKARP 1931
            ...:.|.|.|.:....:::||.|:.|.. |.||.:.|....::.......|.:....:...|   
Zfish   411 QIPITSHTTANEVVRKMAERLGLQDSRNTFGLFEQNACWEKAIGGSTIIADVITRFENLSAK--- 472

  Fly  1932 IRDGANPQFTYQVFFMKKLW--TNTVPGKDRNADLIFHYHQELPKLLRGYHKCSREEAAKLAALV 1994
                 :|....|.....||:  .:|......:.:.:|.|.|....::||......|:...||||.
Zfish   473 -----DPDSDCQCRLCFKLYCLLDTENISTDSIEYLFLYEQCHEMVVRGQLPACEEDLLSLAALR 532

  Fly  1995 FRVRFGENKQELQAIPQMLRELIPSDIMKIQS---------------------------TSEWKR 2032
            .:...|: ...|...| .|.:|.|:::::.::                           ..|..:
Zfish   533 LQYLLGD-FSALSPYP-ALEQLFPAEVVEARALLAPVDPPGCPSFPGGLLAGTLWGHKRRQEQDQ 595

  Fly  2033 SIVASYNQDG---------------GMTSEDAKVAFLKIVYRWPTFGSAFFEVK--QTTEPNYPE 2080
            .:.|...::|               |.:..|:..|:|.|..:|..||...:||.  .::..::.:
Zfish   596 RLRARLREEGAVVMSTILERWKALVGYSGRDSMAAYLTIARQWSGFGCTLYEVDFYISSTGSFSQ 660

  Fly  2081 MLLIAINKHGVSLIHPVTKDILVTHPFTRISNW--SSGNTYFHMTIGNLVRGSKLLCETSLGYKM 2143
            .|.:.:....|:|......:.|.:.|.|:|.::  |..|| |.:|.|:    ..||.||:...::
Zfish   661 KLWLGVAASCVTLYRQGEAEALESLPITQICSYGVSDSNT-FRITAGD----RDLLFETTKLTEI 720

  Fly  2144 DDLLTSYISLMLTNMNKNRTI 2164
            ..|:.:|.|.....:.|:..|
Zfish   721 MQLMNAYFSATRRQLGKDDCI 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_001285949.1 MYSc 64..733 CDD:214580
MYSc_Myo7 77..721 CDD:276832
MyTH4 <1138..1245 CDD:214535
B41 1251..1467 CDD:214604
FERM_B-lobe 1355..1439 CDD:271216
FERM_C1_MyoVII 1461..1559 CDD:270019
SH3 1560..1624 CDD:302595
MyTH4 1701..1849 CDD:214535 47/174 (27%)
B41 1856..2068 CDD:214604 47/256 (18%)
FERM_M 1966..2068 CDD:278785 27/143 (19%)
FERM_C2_MyoVII 2064..2159 CDD:270020 23/98 (23%)
si:ch211-18i17.2XP_700015.5 PH-like 86..199 CDD:302622
PH 90..>177 CDD:278594
MyTH4 282..390 CDD:279165 32/111 (29%)
B41 400..646 CDD:214604 47/255 (18%)
UBQ 405..>445 CDD:294102 11/39 (28%)
FERM_M 494..646 CDD:278785 27/153 (18%)
PH-like 642..733 CDD:302622 23/95 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.710

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