DRSC/TRiP Functional Genomics Resources

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Protein Alignment ck and si:ch211-18i17.2

DIOPT Version :10

Sequence 1:NP_523571.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:XP_700015.5 Gene:si:ch211-18i17.2 / 571341 ZFINID:ZDB-GENE-030131-5404 Length:761 Species:Danio rerio


Alignment Length:541 Identity:120/541 - (22%)
Similarity:211/541 - (39%) Gaps:102/541 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1700 RYSRDPIKAPLL---------RKLQSK--EEFAEEACFAFAAILKYMGDLPSKRPRMGNEITDHI 1753
            ||::.|:.||||         ..:.||  ....|||...|..:.:    |.|.|..:  .:...|
Zfish   227 RYTQSPLYAPLLPFPYGSLHHTHMASKGYTSIREEAVRLFNCLQQ----LESAREPI--PLIQGI 285

  Fly  1754 FDGPLKHEILRDEIYCQLMKQLTDNRNRMSEE-------RGWELMWLATGLFACSQGLLKELLLF 1811
            ....|....||||:||||:||.:...:|:..:       |.|:|:...:..|..|.|:|:.|...
Zfish   286 LQTCLDLRPLRDELYCQLIKQTSTTSSRVQTQTNPNPQLRYWQLLTCMSCTFLPSCGILRYLRFH 350

  Fly  1812 LRTRRHPISQDSM---------HRLQKTIRHGQRKYPPHQVEVEAIQHKTTQIFHKVYFPDDTDE 1867
            |: |...:|.|..         ..|:||  .| |:..|...|::.:..: .:|...|::|.....
Zfish   351 LK-RVQSLSVDPEVESYASFIGQALEKT--RG-RECVPSWEEIQGLMGR-QEILCTVHYPGPGCC 410

  Fly  1868 AFEVDSSTRAKDFCNNISQRLSLRTSEG-FSLFVKIADKVISVPEGDFFFDFVRHLTDWIKKARP 1931
            ...:.|.|.|.:....:::||.|:.|.. |.||.:.|....::.......|.:....:...|   
Zfish   411 QIPITSHTTANEVVRKMAERLGLQDSRNTFGLFEQNACWEKAIGGSTIIADVITRFENLSAK--- 472

  Fly  1932 IRDGANPQFTYQVFFMKKLW--TNTVPGKDRNADLIFHYHQELPKLLRGYHKCSREEAAKLAALV 1994
                 :|....|.....||:  .:|......:.:.:|.|.|....::||......|:...||||.
Zfish   473 -----DPDSDCQCRLCFKLYCLLDTENISTDSIEYLFLYEQCHEMVVRGQLPACEEDLLSLAALR 532

  Fly  1995 FRVRFGENKQELQAIPQMLRELIPSDIMKIQS---------------------------TSEWKR 2032
            .:...|: ...|...| .|.:|.|:::::.::                           ..|..:
Zfish   533 LQYLLGD-FSALSPYP-ALEQLFPAEVVEARALLAPVDPPGCPSFPGGLLAGTLWGHKRRQEQDQ 595

  Fly  2033 SIVASYNQDG---------------GMTSEDAKVAFLKIVYRWPTFGSAFFEVK--QTTEPNYPE 2080
            .:.|...::|               |.:..|:..|:|.|..:|..||...:||.  .::..::.:
Zfish   596 RLRARLREEGAVVMSTILERWKALVGYSGRDSMAAYLTIARQWSGFGCTLYEVDFYISSTGSFSQ 660

  Fly  2081 MLLIAINKHGVSLIHPVTKDILVTHPFTRISNW--SSGNTYFHMTIGNLVRGSKLLCETSLGYKM 2143
            .|.:.:....|:|......:.|.:.|.|:|.::  |..|| |.:|.|:    ..||.||:...::
Zfish   661 KLWLGVAASCVTLYRQGEAEALESLPITQICSYGVSDSNT-FRITAGD----RDLLFETTKLTEI 720

  Fly  2144 DDLLTSYISLMLTNMNKNRTI 2164
            ..|:.:|.|.....:.|:..|
Zfish   721 MQLMNAYFSATRRQLGKDDCI 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_523571.1 MYSc_Myo7 77..721 CDD:276832
MyTH4 <1138..1245 CDD:214535
FERM1_F1_Myosin-VII 1249..1347 CDD:340612
B41 1251..1467 CDD:214604
FERM_C1_MyoVII 1461..1559 CDD:270019
SH3 1560..1624 CDD:473055
MyTH4 1701..1849 CDD:214535 47/174 (27%)
FERM2_F1_Myosin-VII 1854..1951 CDD:340613 19/97 (20%)
B41 1856..2068 CDD:214604 47/256 (18%)
FERM_C2_MyoVII 2064..2159 CDD:270020 23/98 (23%)
si:ch211-18i17.2XP_700015.5 PH-like 86..199 CDD:473070
MyTH4 282..390 CDD:459939 32/111 (29%)
FERM_F1_PLEKHH3 395..490 CDD:340727 20/103 (19%)
B41 400..646 CDD:214604 47/255 (18%)
PH-like 642..733 CDD:473070 23/95 (24%)
Blue background indicates that the domain is not in the aligned region.

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