DRSC/TRiP Functional Genomics Resources

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Protein Alignment ck and LOC556989

DIOPT Version :9

Sequence 1:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:XP_685035.4 Gene:LOC556989 / 556989 -ID:- Length:1124 Species:Danio rerio


Alignment Length:1248 Identity:374/1248 - (29%)
Similarity:567/1248 - (45%) Gaps:297/1248 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EVWLAPERRIKAMHASSVQGV----------EDMISLGDLHEAGILRNLLIRYKENLIYTYTGSI 99
            |:.:..||:......||.:.:          ||:.:|.:|.|..:|..|..|:.:||||||.|.|
Zfish    11 ELLICNERQSDLKFVSSRRSLDREIMEENLPEDLANLSELDEKCLLEVLTGRFTQNLIYTYIGDI 75

  Fly   100 LVAVNPYQILPIYTGDQIKLYKERKIGELPPHIFAIGDNAYAHM----KRYRQDQCIVISGESGA 160
            |||:||::.|.||..:..:.||..:...|||||||:.|.||..|    ....::|||||||||||
Zfish    76 LVAINPFKYLSIYEKEVSQRYKCHEKKSLPPHIFAVADRAYQSMLGRLAMGPKNQCIVISGESGA 140

  Fly   161 GKTESTKLILQYLAAISGKHSWIEQQILEANPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVI 225
            ||||||||:|:::..:...:|.:|||||:.||:|||||||:|:.|||||||||||.:.|. |..:
Zfish   141 GKTESTKLLLRHIMELCKANSQLEQQILQVNPLLEAFGNAQTVMNDNSSRFGKYIQLRFQ-NSSV 204

  Fly   226 EGAKIEQYLLEKSRIVSQNHSERNYHVFYCILAGLSADEKSRLDLGMAADYKYLTGGNSITCEGR 290
            :||||.:|||||||:|.|:..|:|:|:||.:|||:|.::|....|.....|:||.|.     .|:
Zfish   205 KGAKINEYLLEKSRVVHQDQGEQNFHIFYLMLAGISLEDKEIYGLLDPTLYRYLNGR-----FGQ 264

  Fly   291 DDAAE-----FSDIRSAMKVLLFSDQEIWEIIKLLAALLHCGNIKYKATVVDNLDATEIPEHINV 350
            :|..:     ::::.:||.::.|.:||..:::.:||.:|..|||.::.|..|.|..:|..... :
Zfish   265 EDVVQTWRVKYAEVCNAMDMVGFEEQEKVDMMTILAGILSLGNITFETTDSDALKVSEASRGW-L 328

  Fly   351 ERVAGLLGLPIQPLIDALTRRTLFAHGETVVSTLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTA 415
            :..||..|:..:.|:.:||..|....||.:....::.|:.|.||:..|..|||:|..||.|||..
Zfish   329 KATAGQFGVQEEDLLKSLTCTTSMTRGEAIQRLHNQQQAEDARDSIAKVAYGRVFGWIVSKINEQ 393

  Fly   416 IFKPR---GTSRNAIGVLDIFGFENFDQNSFEQFCINYANENLQQFFVQHIFKLEQEEYNHEAIN 477
            : .|:   ....|.||:|||||||||..|.|||.|||.|||.||.||..|||.:||:||..|.|.
Zfish   394 L-APKVDFDVELNEIGILDIFGFENFAVNRFEQLCINLANEQLQYFFNHHIFLMEQKEYKEEGIT 457

  Fly   478 WQHIEFVDNQDALDLIAIKQLNIMALIDEEARFPKGTDQTMLAKLHKTHGSHKNYLKPKSDINTS 542
            |:.|.:.||:..|||..:|.:.|::|:||::.||:.||:..:.||:....|..|:...::. ...
Zfish   458 WETITYKDNKPILDLFLMKPIGILSLLDEQSAFPQATDRDFVDKLNSKFKSAPNFEVVRNH-TPL 521

  Fly   543 FGLNHFAGVVFYDTRGFLDKNRDTFSPDLLHLVSQSTNKFLRQIFAQDIEMGA------------ 595
            |.:.|:||.|.|:..|||:|||||....:..|...|....|..:||..|....            
Zfish   522 FTVVHYAGKVQYNASGFLEKNRDTIPASIRELFINSVTPLLSVLFAATISRTGTLMPRKAKLQVS 586

  Fly   596 -----ETRKRTPTLSTQFRKSLDALMKTLSSCQPFFIRCIKPNELKKPMMFDRGLCCRQLRYSGM 655
                 .|||:  ::..||:.||..||:.:.:..|.|:||||||..|:|...|..|...||||:|:
Zfish   587 DDNFNSTRKQ--SVGAQFKHSLAVLMEKMFAASPHFVRCIKPNRSKQPDQLDSKLVLDQLRYNGL 649

  Fly   656 METIRIRRAGYPIRHGFREFVERYRFLI--PGVPPAHRTDCQAATSRICAVVLGKSDYQLGHTKV 718
            ||||||||.|:..|..||||.|||..|:  |.:|    ||..:..|.:.:..|  |.::.|.:::
Zfish   650 METIRIRRDGFSWRPTFREFAERYNILLLKPDLP----TDKSSCMSILNSTEL--SGWKCGSSRL 708

  Fly   719 FLKDAHDLFLEQERDRVLTRKILILQRSIRGWVYRRRFLRLRAAAITVQRFWKGYAQRKRYRNMR 783
            |.|..|.:.|....|| |.|..|::|::.|....||::|.|.|                      
Zfish   709 FFKLCHQVELANLLDR-LGRAALVIQKNFRARTCRRKYLCLLA---------------------- 750

  Fly   784 VGYMRLQALIRSRVLSHRFRHLRGHIVGLQAHARGYLVRREYGHKMWAVIKIQSHVRRMIAMRRY 848
                                                                        .:||.
Zfish   751 ------------------------------------------------------------ELRRQ 755

  Fly   849 RKLRLEHKQFAEVLQLRKLEEQELLHRGNKHAREIAEQHYRDRLHELERREIQEQLENRRRVEVN 913
            |:.:.|                          ||..|:..|.|..|.:||:.|::.|.:||:||.
Zfish   756 RQAQRE--------------------------REEREEEERRRQEEEKRRQQQQEAERKRRLEVE 794

  Fly   914 MNIINDAA-------RKQEEPVDDGKLVEAMFDFLPDSSSDAPTPHGGRE----TSVFNDLPHAQ 967
            ...:..|:       :|:.||     ...::...:..::|.||.|....:    |...|||....
Zfish   795 QENLRPASPPVPLPRKKKPEP-----RPRSVLSSISKTASVAPVPRPRSKLLEATPFDNDLNENF 854

  Fly   968 NVNQDDIIAPIHISEDEEDLSEFKFQK------FAAT-------------YFQGNVNHQYAKKAL 1013
            :::...::.||    |||.:.|...:|      |..|             :|.|.:..:.|:..|
Zfish   855 HLDASLMLQPI----DEERIKEKHLKKSNTIRWFRETQVRKLTRDGSFPHWFHGMITRRQAEDLL 915

  Fly  1014 -----------------------------KHPLLPLHTQ------GDQLAAQALWITILRFT--- 1040
                                         :|.::.:.:.      |:..|..:|...:...|   
Zfish   916 IDKPLGCFLVRVGQSREGFTLTFRGADRCRHYMVEMQSNGKYVILGEDRAHSSLTDLVQYHTQVG 980

  Fly  1041 ------------GDM--PEPKYHTM--------------DRMDTTSVMSKVTATLGRNFI----- 1072
                        |.|  .||.|..:              :.|||.|  :||...:.|.|:     
Zfish   981 IKPFMELLTVPCGQMCDQEPDYEELKAFSSAVESVDGPAENMDTGS--NKVHLQMQRLFLPPGGN 1043

  Fly  1073 ----------------RSKEFQEAQLMGLDPDAFLKQKPRSIRHKLVSLTLKRKNKLGEDVRRRL 1121
                            |.:..:.||....:.|...:.:|....:..:.|.::...::.|..:.::
Zfish  1044 SNHEHHRAPVLKRISDRRRRMEAAQTERKEEDLTNQSRPFPRLYPSIRLAMREIQQIQEQSQEQI 1108

  Fly  1122 QDDEYTADSYQSW 1134
            |..  ::....||
Zfish  1109 QIP--SSKDLSSW 1119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_001285949.1 MYSc 64..733 CDD:214580 286/709 (40%)
MYSc_Myo7 77..721 CDD:276832 278/674 (41%)
MyTH4 <1138..1245 CDD:214535
B41 1251..1467 CDD:214604
FERM_B-lobe 1355..1439 CDD:271216
FERM_C1_MyoVII 1461..1559 CDD:270019
SH3 1560..1624 CDD:302595
MyTH4 1701..1849 CDD:214535
B41 1856..2068 CDD:214604
FERM_M 1966..2068 CDD:278785
FERM_C2_MyoVII 2064..2159 CDD:270020
LOC556989XP_685035.4 MYSc 34..711 CDD:214580 283/693 (41%)
MYSc_Myo28 53..711 CDD:276854 278/674 (41%)
SH2 895..992 CDD:301589 9/96 (9%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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